Factsheet for HORVU3Hr1G047290.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G200300.1	Wheat	nucleus	89.11	89.4
TraesCS3B01G224500.1	Wheat	nucleus	89.44	87.42
EES03100	Sorghum	nucleus	72.61	64.52
GSMUA_Achr3P28540_001	Banana	nucleus	41.58	41.04
GSMUA_Achr4P06410_001	Banana	nucleus	40.26	39.87
GSMUA_Achr9P22190_001	Banana	nucleus	41.25	39.68
GSMUA_Achr4P13280_001	Banana	nucleus	38.28	38.03
PGSC0003DMT400069644	Potato	nucleus	36.3	34.92
HORVU1Hr1G079040.4	Barley	nucleus, plastid	39.93	34.38
KRH63612	Soybean	nucleus	40.59	34.26
Solyc06g071690.2.1	Tomato	nucleus	35.97	33.96
Solyc03g112390.2.1	Tomato	nucleus	36.3	33.85
PGSC0003DMT400046645	Potato	nucleus	36.3	33.85
KRH57123	Soybean	nucleus	41.25	33.78
KRH54334	Soybean	nucleus	40.26	33.52
KRH03235	Soybean	nucleus	39.27	32.87
HORVU3Hr1G016940.1	Barley	nucleus	31.02	32.87
HORVU3Hr1G066860.11	Barley	nucleus	31.68	32.65
VIT_17s0000g09080.t01	Wine grape	nucleus	38.61	32.23
HORVU7Hr1G082020.1	Barley	nucleus	35.31	30.57
HORVU7Hr1G072450.2	Barley	nucleus	30.69	27.27
HORVU6Hr1G007010.2	Barley	nucleus	27.72	26.84
HORVU1Hr1G017970.4	Barley	nucleus	37.95	26.81
HORVU6Hr1G060610.3	Barley	nucleus	27.06	26.62
HORVU6Hr1G060600.2	Barley	mitochondrion	19.47	26.46
HORVU2Hr1G091590.1	Barley	nucleus	25.74	25.66
HORVU2Hr1G051030.3	Barley	nucleus	32.34	25.65
HORVU2Hr1G051010.1	Barley	nucleus, plasma membrane	32.01	25.39
HORVU5Hr1G027750.1	Barley	nucleus	30.69	20.04
HORVU1Hr1G079030.2	Barley	nucleus	28.38	18.14

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
EnsemblPlantsGene:HORVU3Hr1G047290	EnsemblPlants:HORVU3Hr1G047290.2	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0XN83	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF661	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002960D82	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:321696484..321698294

Molecular Weight (calculated)

33676.4 Da

IEP (calculated)

6.096

GRAVY (calculated)

-0.601

Length

303 amino acids

Sequence
(BLAST)

001: MRAMGREAAA AACSSNKPKL RRGLWSPEED EKLYNHIIRY GVGCWSSVPR LAGLERCGKS CRLRWINYLR PDLKRGSFSQ QEEDLIVSLH KIIGNRWSQI
101: ASQLPGRTDN EIKNFWNSCI KKKLRQLSID STTHKPLNDA VAVAEPHDDC KQLVPGAEDR CFGGSGSGSD DLLAPHSPVD CSFDPTSVTN VPTITMHMQD
201: AYSLCDYGAT TYSAYTGGGG SSSNGTWTCG NGNVEPLPHM DMFRDAAEPY PFDPSKFSQW QQQQAPDDHR GSTVFPIRSL SRDLPESCFE LARGALEDEF
301: DFM

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.