Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g071690.2.1 | Tomato | nucleus | 93.65 | 91.9 |
| PGSC0003DMT400046645 | Potato | nucleus | 61.27 | 59.38 |
| VIT_17s0000g09080.t01 | Wine grape | nucleus | 62.86 | 54.55 |
| KRH63612 | Soybean | nucleus | 53.65 | 47.08 |
| KRH54334 | Soybean | nucleus | 54.29 | 46.98 |
| KRH57123 | Soybean | nucleus | 54.92 | 46.76 |
| KRH03235 | Soybean | nucleus | 52.06 | 45.3 |
| TraesCS3B01G286500.1 | Wheat | nucleus | 37.46 | 41.99 |
| TraesCS3D01G255400.1 | Wheat | nucleus | 37.78 | 41.75 |
| TraesCS1D01G371900.1 | Wheat | nucleus | 37.14 | 41.64 |
| TraesCS1B01G383700.1 | Wheat | nucleus | 38.41 | 41.3 |
| TraesCS1D01G371700.1 | Wheat | nucleus | 38.41 | 41.3 |
| TraesCS1A01G366100.1 | Wheat | nucleus | 38.1 | 41.1 |
| TraesCS1D01G371800.1 | Wheat | nucleus | 37.78 | 41.03 |
| TraesCS1A01G365900.1 | Wheat | nucleus | 38.1 | 40.4 |
| Zm00001d009435_P001 | Maize | nucleus | 32.38 | 40.32 |
| TraesCS1B01G383800.1 | Wheat | nucleus | 36.83 | 40.28 |
| TraesCS1A01G366200.1 | Wheat | nucleus | 37.78 | 40.2 |
| TraesCS1D01G371500.1 | Wheat | nucleus | 37.78 | 39.93 |
| Os01t0702700-01 | Rice | nucleus | 38.1 | 39.87 |
| TraesCS1A01G366300.1 | Wheat | nucleus | 36.51 | 39.79 |
| TraesCS1B01G383900.1 | Wheat | nucleus | 36.51 | 39.79 |
| TraesCS1B01G383600.1 | Wheat | nucleus | 38.41 | 39.67 |
| TraesCS1D01G371400.1 | Wheat | nucleus | 38.1 | 39.6 |
| GSMUA_Achr3P28540_001 | Banana | nucleus | 38.41 | 39.41 |
| EES18602 | Sorghum | nucleus | 39.05 | 38.2 |
| TraesCS3A01G200300.1 | Wheat | nucleus | 36.51 | 38.08 |
| TraesCS3A01G254500.1 | Wheat | nucleus | 37.78 | 37.66 |
| EES03490 | Sorghum | nucleus | 37.46 | 37.58 |
| Zm00001d038878_P001 | Maize | nucleus | 38.41 | 37.58 |
| Os05t0543600-01 | Rice | nucleus | 37.14 | 37.5 |
| TraesCS1A01G366000.1 | Wheat | nucleus | 33.33 | 37.5 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 37.14 | 37.14 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 35.87 | 36.93 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 36.19 | 36.77 |
| PGSC0003DMT400087467 | Potato | nucleus | 32.06 | 36.73 |
| HORVU3Hr1G047290.2 | Barley | nucleus | 34.92 | 36.3 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 34.29 | 35.41 |
| EES03100 | Sorghum | nucleus | 38.1 | 35.19 |
| Zm00001d043729_P001 | Maize | nucleus | 23.81 | 32.75 |
| EES02393 | Sorghum | nucleus | 28.89 | 32.5 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 31.11 | 31.61 |
| PGSC0003DMT400047076 | Potato | nucleus | 42.54 | 31.46 |
| HORVU1Hr1G079040.4 | Barley | nucleus, plastid | 34.92 | 31.25 |
| Zm00001d011669_P001 | Maize | nucleus | 23.81 | 31.25 |
| PGSC0003DMT400018897 | Potato | nucleus | 31.75 | 31.25 |
| EES07893 | Sorghum | nucleus | 25.08 | 31.23 |
| PGSC0003DMT400037080 | Potato | nucleus | 26.67 | 30.22 |
| Zm00001d005055_P001 | Maize | nucleus | 21.59 | 29.96 |
| PGSC0003DMT400040774 | Potato | nucleus | 38.1 | 29.48 |
| Zm00001d039700_P001 | Maize | nucleus | 22.22 | 29.29 |
| OQU86237 | Sorghum | nucleus | 24.76 | 29.0 |
| TraesCS3D01G094500.1 | Wheat | nucleus | 25.71 | 28.42 |
| TraesCS3A01G094300.1 | Wheat | nucleus | 24.76 | 28.06 |
| HORVU3Hr1G016940.1 | Barley | nucleus | 25.4 | 27.97 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 25.08 | 27.82 |
| Zm00001d008695_P001 | Maize | nucleus | 23.81 | 27.08 |
| PGSC0003DMT400017709 | Potato | nucleus | 30.48 | 27.04 |
| PGSC0003DMT400018995 | Potato | nucleus | 28.89 | 25.93 |
| HORVU1Hr1G079030.2 | Barley | nucleus | 25.08 | 16.67 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102586930 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1CKU4 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400027077 | PGSC:PGSC0003DMG400027077 | EnsemblPlants:PGSC0003DMT400069644 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF466 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000294C9C0 | RefSeq:XP_006347432.1 | SEG:seg |
Description
R2r3-myb transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400027077]
Coordinates
chr6:+:52526603..52528380
Molecular Weight (calculated)
36248.5 Da
IEP (calculated)
7.424
GRAVY (calculated)
-0.754
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSVFVKE KTRKGLWSPE EDEKLYNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGMF SQEEEDMIIT LHKVVGNRWA QIAAKLPGRT
101: DNEIKNFWNS NLKKKLIKQG IDPNTHKPLS ENHQVRNETN YTDKASSLLP NMSNSAEIEQ PFHFNSKRSF NSEAITRQLT EVSRNQLVSK QVFDPLFLYE
201: FQANVNPIGP YVHHHNQIEG NQDFGFCSNF QHGHMTTESD ISDSSTSRMS TSNSSNTMIS HYSSAGIQIN EMLEWDADNK IDSLIQYPYV GIKNEENFSN
301: NNPLSGENLD VFHHI
101: DNEIKNFWNS NLKKKLIKQG IDPNTHKPLS ENHQVRNETN YTDKASSLLP NMSNSAEIEQ PFHFNSKRSF NSEAITRQLT EVSRNQLVSK QVFDPLFLYE
201: FQANVNPIGP YVHHHNQIEG NQDFGFCSNF QHGHMTTESD ISDSSTSRMS TSNSSNTMIS HYSSAGIQIN EMLEWDADNK IDSLIQYPYV GIKNEENFSN
301: NNPLSGENLD VFHHI
001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
Arabidopsis Description
MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.