Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G094500.1 | Wheat | nucleus | 93.53 | 91.23 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 93.17 | 91.2 |
| HORVU3Hr1G016940.1 | Barley | nucleus | 88.85 | 86.36 |
| OQU86237 | Sorghum | nucleus | 56.47 | 58.36 |
| Zm00001d008695_P001 | Maize | nucleus | 55.4 | 55.6 |
| TraesCS1A01G366100.1 | Wheat | nucleus | 30.94 | 29.45 |
| TraesCS3A01G200300.1 | Wheat | nucleus | 31.65 | 29.14 |
| TraesCS1A01G366200.1 | Wheat | nucleus | 30.94 | 29.05 |
| TraesCS1A01G365900.1 | Wheat | nucleus | 30.94 | 28.96 |
| TraesCS2A01G152900.1 | Wheat | nucleus | 24.1 | 28.03 |
| TraesCS1A01G366300.1 | Wheat | nucleus | 28.78 | 27.68 |
| TraesCS1A01G366000.1 | Wheat | nucleus | 26.98 | 26.79 |
| TraesCS2A01G370300.1 | Wheat | nucleus | 26.62 | 26.71 |
| TraesCS2A01G370700.1 | Wheat | nucleus | 26.26 | 26.35 |
| TraesCS2A01G370400.1 | Wheat | nucleus | 26.62 | 26.15 |
| TraesCS6A01G236700.1 | Wheat | nucleus | 26.98 | 26.13 |
| TraesCS3A01G254500.1 | Wheat | nucleus | 29.5 | 25.95 |
| TraesCS3A01G251200.1 | Wheat | nucleus | 26.26 | 24.91 |
| PGSC0003DMT400069644 | Potato | nucleus | 28.06 | 24.76 |
| Solyc06g071690.2.1 | Tomato | nucleus | 28.42 | 24.61 |
| TraesCS4A01G411900.1 | Wheat | nucleus | 22.3 | 24.51 |
| Solyc03g112390.2.1 | Tomato | nucleus | 27.7 | 23.69 |
| PGSC0003DMT400046645 | Potato | nucleus | 27.7 | 23.69 |
| VIT_17s0000g09080.t01 | Wine grape | nucleus | 30.58 | 23.42 |
| KRH63612 | Soybean | nucleus | 29.86 | 23.12 |
| TraesCS7A01G304500.1 | Wheat | nucleus | 28.42 | 23.03 |
| TraesCS7A01G333200.1 | Wheat | nucleus | 20.14 | 22.49 |
| KRH54334 | Soybean | nucleus | 29.14 | 22.25 |
| KRH57123 | Soybean | nucleus | 29.5 | 22.16 |
| KRH03235 | Soybean | nucleus | 28.78 | 22.1 |
| TraesCS2A01G152700.1 | Wheat | nucleus | 28.78 | 22.04 |
| TraesCS6A01G037700.1 | Wheat | nucleus | 27.7 | 21.69 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 26.98 | 19.28 |
| TraesCS2A01G230400.1 | Wheat | nucleus | 25.9 | 19.0 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 28.42 | 18.37 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G094300.1 | EnsemblPlantsGene:TraesCS3A01G094300 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF661 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:60297466..60298406
Molecular Weight (calculated)
29749.8 Da
IEP (calculated)
6.369
GRAVY (calculated)
-0.598
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEKPASQAD VGGEVEAHKE RKGLWSPEED ERLYTRITRH GVSTWSSVAQ LAGLRRSGKS CRLRWMNYLR PDLKKEPISK REEETIISLQ KSLGNRWSVI
101: AGKMPGRTDN EIKNYWNSRI RKRQTLSTGG GKGDSGLAKQ GDLPAADDKA SVLAGPRGKE PVSSMASGAT VPPVPARFPM FACQLLGGGG GAAAIAAAGT
201: TESTTTHQNN GAGSESDAAS VGNGSAAGDD GREGHYYYCA VDGDIDMVHL MSFDDLLEYP AGDLLMDAWD QNGLYSTN
101: AGKMPGRTDN EIKNYWNSRI RKRQTLSTGG GKGDSGLAKQ GDLPAADDKA SVLAGPRGKE PVSSMASGAT VPPVPARFPM FACQLLGGGG GAAAIAAAGT
201: TESTTTHQNN GAGSESDAAS VGNGSAAGDD GREGHYYYCA VDGDIDMVHL MSFDDLLEYP AGDLLMDAWD QNGLYSTN
001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
Arabidopsis Description
MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.