Factsheet for TraesCS7A01G333200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G152900.1	Wheat	nucleus	38.55	40.17
Zm00001d022259_P002	Maize	nucleus	56.22	40.11
TraesCS2A01G152700.1	Wheat	nucleus	56.22	38.57
EER97608	Sorghum	nucleus	58.63	38.32
TraesCS1A01G366000.1	Wheat	nucleus	33.73	30.0
TraesCS4A01G411900.1	Wheat	nucleus	29.72	29.25
TraesCS1A01G365900.1	Wheat	nucleus	34.54	28.96
TraesCS1A01G366200.1	Wheat	nucleus	34.14	28.72
TraesCS1A01G366100.1	Wheat	nucleus	32.93	28.08
TraesCS3A01G200300.1	Wheat	nucleus	32.53	26.82
TraesCS3A01G254500.1	Wheat	nucleus	33.73	26.58
TraesCS1A01G366300.1	Wheat	nucleus	30.52	26.3
TraesCS2A01G370300.1	Wheat	nucleus	26.91	24.19
TraesCS3A01G251200.1	Wheat	nucleus	27.71	23.55
TraesCS2A01G370700.1	Wheat	nucleus	26.1	23.47
TraesCS2A01G370400.1	Wheat	nucleus	26.1	22.97
TraesCS1A01G083100.2	Wheat	nucleus	38.55	22.33
TraesCS6A01G236700.1	Wheat	nucleus	25.7	22.3
TraesCS3A01G094300.1	Wheat	nucleus	22.49	20.14
TraesCS2A01G230400.1	Wheat	nucleus	29.72	19.53
TraesCS7A01G304500.1	Wheat	nucleus	25.7	18.66
TraesCS5A01G101000.1	Wheat	nucleus	26.91	17.22
TraesCS6A01G037700.1	Wheat	nucleus	24.5	17.18

Protein Annotations

EnsemblPlants:TraesCS7A01G333200.1	EnsemblPlantsGene:TraesCS7A01G333200	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:IPR017930	InterPro:Myb-like_dom	InterPro:Myb_dom
InterPro:SANT/Myb	PANTHER:PTHR10641	PANTHER:PTHR10641:SF601	PFAM:PF00249	PFscan:PS50090	PFscan:PS51294
SEG:seg	SMART:SM00717	SUPFAM:SSF46689	TIGR:cd00167	MapMan:15.5.2.1	:

Description

No Description!

Coordinates

chr7A:-:486236463..486237283

Molecular Weight (calculated)

27102.8 Da

IEP (calculated)

4.717

GRAVY (calculated)

-0.321

Length

249 amino acids

Sequence
(BLAST)

001: SGLERCGKSC RLRWINYLRP DLKRGTFSQE EEDLIIHLHS MLGNKWSQIA AQLPGRTDNE VKNFWNSYIK KKLRERGIDP ATHKPLAEAT TTSPTACRAV
101: FSDAELVPTT AALAQDQVEK MLDSLKMPLD WPVGGVAGNG VPESYQMPSL QEGCAFHMGA LQQHCGAIPS ASSSSTLTAA DVGAALPWLE LGPTDTISGH
201: VDQYAGALGE LRWSDYFDGA LQGQCVYDSG MVDDDAVQFD DVHGLSSWC

Best Arabidopsis Sequence Match ( AT5G26660.2 )
(BLAST)

001: MFLYALVDIY DQIGLQRCGK SCRLRWINYL RPDLKRGAFS QDEESLIIEL HAALGNRWSQ IATRLPGRTD NEIKNFWNSC LKKKLRRKGI DPTTHKPLIT
101: NELQSLNVID QKLTSSEVVK STGSINNLHD QSMVVSSQQG PWWFPANTTT TNQNSAFCFS SSNTTTVSDQ IVSLISSMST SSSPTPMTSN FSPAPNNWEQ
201: LNYCNTVPSQ SNSIYSAFFG NQYTEASQTM NNNNPLVDQH HHHQDMKSWA SEILHYTEHN QSSETVIEAE VKPDIANYYW RSASSSSSPN QEAATLLHDA
301: NVEVYGKNLQ KLNNMVFDQS L

Arabidopsis Description

MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.