Factsheet for TraesCS2A01G152700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G158200.1	Wheat	nucleus	93.94	97.71
TraesCS2B01G177900.1	Wheat	nucleus	94.21	94.74
TraesCS2A01G152900.1	Wheat	nucleus	54.55	82.85
Zm00001d022259_P002	Maize	nucleus	65.29	67.91
EER97608	Sorghum	nucleus	69.42	66.14
TraesCS7A01G333200.1	Wheat	nucleus	38.57	56.22
TraesCS1A01G365900.1	Wheat	nucleus	33.06	40.4
TraesCS1A01G366200.1	Wheat	nucleus	32.78	40.2
TraesCS1A01G366100.1	Wheat	nucleus	32.23	40.07
TraesCS4A01G411900.1	Wheat	nucleus	27.55	39.53
TraesCS1A01G366300.1	Wheat	nucleus	30.58	38.41
TraesCS1A01G366000.1	Wheat	nucleus	29.2	37.86
TraesCS3A01G200300.1	Wheat	nucleus	31.13	37.42
TraesCS3A01G254500.1	Wheat	nucleus	32.23	37.03
TraesCS3A01G251200.1	Wheat	nucleus	26.72	33.11
TraesCS2A01G370300.1	Wheat	nucleus	25.07	32.85
TraesCS2A01G370700.1	Wheat	nucleus	24.52	32.13
TraesCS1A01G083100.2	Wheat	nucleus	36.91	31.16
TraesCS2A01G370400.1	Wheat	nucleus	24.24	31.1
TraesCS6A01G236700.1	Wheat	nucleus	24.24	30.66
TraesCS3A01G094300.1	Wheat	nucleus	22.04	28.78
TraesCS2A01G230400.1	Wheat	nucleus	28.93	27.7
TraesCS7A01G304500.1	Wheat	nucleus	24.79	26.24
TraesCS6A01G037700.1	Wheat	nucleus	24.24	24.79
TraesCS5A01G101000.1	Wheat	nucleus	26.45	24.68

Protein Annotations

EnsemblPlants:TraesCS2A01G152700.1	EnsemblPlantsGene:TraesCS2A01G152700	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF601	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:100824953..100826650

Molecular Weight (calculated)

38454.5 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.462

Length

363 amino acids

Sequence
(BLAST)

001: MSKRPGGTKK RLKRGLWSPE EDEKLMNHIA KYGNGCWSSV PKIAGLERCG KSCRLRWINY LRPDLKRGAF SQEEEDLIIH LHSILGNKWS QIAAQLPGRT
101: DNEVKNFWNS FIKKKLRQRG IDPATHKPLA PAGAAAAATP VSRSAVFSEA ELILSSPVGG PHMPPLVSAE SYVYSRGSMD GAGGVVGGCS DDGSLSSLSG
201: YNNNNQTADF AGYLDADALH GAVIPSVSSS STLNSMAGVS PGGVANGNAT DELCCNNNNK NNPSNSGSGF ESSTTQSSSN HHLPWLELGS ISSCTEDGNA
301: AGAAADHYGA ALDELKWSDY VFDGGYPQYH QQGQCIYGDS KAAADAATAQ FDAHGLGINW CLN

Best Arabidopsis Sequence Match ( AT1G57560.1 )
(BLAST)

001: MKRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLERCG KSCRLRWINY LRPDLKRGAF SSEEQNLIVE LHAVLGNRWS QIAARLPGRT
101: DNEIKNLWNS CIKKKLMKKG IDPITHKPLS EVGKETNRSD NNNSTSFSSE TNQDLFVKKT SDFAEYSAFQ KEESNSVSLR NSLSSMIPTQ FNIDDGSVSN
201: AGFDTQVCVK PSIILLPPPN NTSSTVSGQD HVNVSEPNWE SNSGTTSHLN NPGMEEMKWS EEYLNESLFS TQVYVKSETD FNSNIAFPWS QSQACDVFPK
301: DLQRMAFSFG GQTL

Arabidopsis Description

AtMYB50At1g57560 [Source:UniProtKB/TrEMBL;Acc:Q9C695]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.