CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022259_P002	Maize	nucleus	82.41	89.97
TraesCS2D01G158200.1	Wheat	nucleus	65.88	71.92
TraesCS2A01G152700.1	Wheat	nucleus	66.14	69.42
TraesCS2B01G177900.1	Wheat	nucleus	65.62	69.25
TraesCS2B01G178000.1	Wheat	nucleus	34.12	66.67
TraesCS2A01G152900.1	Wheat	nucleus	41.73	66.53
TraesCS2D01G158300.1	Wheat	nucleus	48.82	65.26
TraesCS7A01G333200.1	Wheat	nucleus	38.32	58.63
EER92216	Sorghum	nucleus	48.03	55.45
TraesCS4D01G309700.1	Wheat	nucleus	25.2	43.64
EES03490	Sorghum	nucleus	32.02	38.85
TraesCS4A01G411900.1	Wheat	nucleus	25.72	38.74
TraesCS4B01G312100.1	Wheat	nucleus	26.25	38.31
EES18602	Sorghum	nucleus	32.28	38.2
EES02393	Sorghum	nucleus	26.77	36.43
EES03100	Sorghum	nucleus	32.28	36.07
OQU77376	Sorghum	nucleus	37.8	33.49
EES02806	Sorghum	nucleus	37.01	33.02
EES07893	Sorghum	nucleus	21.78	32.81
EES03504	Sorghum	nucleus	26.77	31.97
EES11177	Sorghum	nucleus	23.88	30.54
OQU86237	Sorghum	nucleus	21.52	30.48
EES06150	Sorghum	nucleus	23.36	29.77
EES07547	Sorghum	nucleus	23.36	29.18
EES13346	Sorghum	nucleus	25.2	27.2
EER97244	Sorghum	nucleus	26.77	26.56
EES17106	Sorghum	nucleus	23.1	21.05

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:8079379	UniProt:C5X3A0	EnsemblPlants:EER97608	ProteinID:EER97608
ProteinID:EER97608.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF601	InterPro:SANT/Myb	SMART:SM00717
EnsemblPlantsGene:SORBI_3002G388700	SUPFAM:SSF46689	unigene:Sbi.20138	UniParc:UPI0001A83A16	RefSeq:XP_002461087.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:74246294..74248187

Molecular Weight (calculated)

40266.7 Da

IEP (calculated)

7.256

GRAVY (calculated)

-0.426

Length

381 amino acids

Sequence
(BLAST)

001: MARRTSGPKK KLRRGLWSPE EDDKLINHIA KYGHGCWSSV PKLAGLERCG KSCRLRWINY LRPDLKRGAF SQEEEDLIIH LHSMMGNKWS QIATQLPGRT
101: DNEVKNFWNS YIKKKLRQRG IDPATHKPLP LAADASRAAA AGSSRTAVFS DAELILSSTT TAAAGQHMPP PPVTAAAAES YDVYSNSYSR SSGGGGASDG
201: SLQSLSGYKY NNSSKQTAAD HLGAAAAAGY LQDPAAADAL CCGPSGVPAV VLPSVSSSST LNSMAGLSPA ATTTATDEQC NNNNNNCSSC NNGFELMSTT
301: PHSCCSNHHL PWLELGTSGY GGAASAGVVD HYGAALDELK WSDYVFDGYG GQPGQSIYGD SKDAVQFVDA SALSSSSWCL N

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.