Factsheet for TraesCS4B01G312100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G309700.1	Wheat	nucleus	77.39	91.82
TraesCS4A01G411900.1	Wheat	nucleus	81.61	84.19
TraesCS2B01G178000.1	Wheat	nucleus	31.8	42.56
TraesCS7B01G244200.1	Wheat	nucleus	37.93	34.14
TraesCS3B01G286500.1	Wheat	nucleus	36.02	33.45
TraesCS1B01G383700.1	Wheat	nucleus	36.78	32.76
TraesCS1B01G383800.1	Wheat	nucleus	36.02	32.64
TraesCS1B01G383900.1	Wheat	nucleus	35.25	31.83
TraesCS1B01G383600.1	Wheat	nucleus	36.02	30.82
TraesCS3B01G224500.1	Wheat	nucleus	35.25	29.68
Zm00001d022259_P002	Maize	nucleus	37.93	28.37
TraesCS2B01G177900.1	Wheat	nucleus	39.08	28.25
TraesCS2B01G387300.1	Wheat	nucleus	29.5	28.1
TraesCS2B01G387800.1	Wheat	nucleus	29.89	27.96
TraesCS2B01G387700.1	Wheat	nucleus	29.12	27.74
TraesCS2B01G387500.1	Wheat	nucleus	29.12	26.86
EER97608	Sorghum	nucleus	38.31	26.25
TraesCS3B01G280700.1	Wheat	nucleus	27.59	25.17
TraesCS6B01G053100.1	Wheat	nucleus	28.74	24.35
TraesCS6B01G265200.1	Wheat	nucleus	27.2	24.07
TraesCS1B01G100600.1	Wheat	nucleus	39.46	23.9
TraesCS3B01G109800.1	Wheat	nucleus	24.9	22.89
TraesCS7B01G204800.1	Wheat	nucleus	29.12	22.03
TraesCS2B01G252000.1	Wheat	nucleus	30.65	20.94
TraesCS5B01G105900.1	Wheat	nucleus	29.5	19.74

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF601	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS4B01G312100	EnsemblPlants:TraesCS4B01G312100.1
TIGR:cd00167	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:601792107..601793130

Molecular Weight (calculated)

28189.1 Da

IEP (calculated)

7.906

GRAVY (calculated)

-0.527

Length

261 amino acids

Sequence
(BLAST)

001: MSKAPRGPRK AVRRGPWSTE EDAKLMNHVA KHGLGRWSDI PRLAGIERCG KSCRLRWLNY LRPDLKRAAL SQEEEDLIIQ LHSIIGNSWT LIAACLPGRT
101: DNGVKNFWNA SIKHKLRRRG IDPDTHEPMV DEGRRNGDAQ HILPSHLAAG SNTCSHGAVP LPDSITRYMG TDPLQLQHGV VLVQPVVSSS STVGSDPSSS
201: GSDTGEQCNN GADSGSQLFD LTASSTTTTE SGGQHEPHLL PSPAGWSCSA STLTGSVSYW L

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.