Factsheet for TraesCS2B01G178000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G152900.1	Wheat	nucleus	78.97	64.44
TraesCS2D01G158300.1	Wheat	nucleus	81.03	55.44
TraesCS2B01G177900.1	Wheat	nucleus	77.95	42.11
TraesCS7B01G244200.1	Wheat	nucleus	58.46	39.31
Zm00001d022259_P002	Maize	nucleus	65.13	36.39
EER97608	Sorghum	nucleus	66.67	34.12
TraesCS3B01G286500.1	Wheat	nucleus	46.15	32.03
TraesCS1B01G383800.1	Wheat	nucleus	47.18	31.94
TraesCS4B01G312100.1	Wheat	nucleus	42.56	31.8
TraesCS1B01G383900.1	Wheat	nucleus	46.15	31.14
TraesCS1B01G383700.1	Wheat	nucleus	46.67	31.06
TraesCS1B01G383600.1	Wheat	nucleus	47.18	30.16
TraesCS3B01G224500.1	Wheat	nucleus	46.15	29.03
TraesCS2B01G387300.1	Wheat	nucleus	37.44	26.64
TraesCS2B01G387700.1	Wheat	nucleus	36.92	26.28
TraesCS2B01G387800.1	Wheat	nucleus	37.44	26.16
TraesCS2B01G387500.1	Wheat	nucleus	37.44	25.8
TraesCS3B01G109800.1	Wheat	nucleus	35.38	24.3
TraesCS6B01G265200.1	Wheat	nucleus	36.41	24.07
TraesCS3B01G280700.1	Wheat	nucleus	34.87	23.78
TraesCS7B01G204800.1	Wheat	nucleus	41.54	23.48
TraesCS6B01G053100.1	Wheat	nucleus	35.38	22.4
TraesCS2B01G252000.1	Wheat	nucleus	41.54	21.2
TraesCS1B01G100600.1	Wheat	nucleus	46.67	21.11
TraesCS5B01G105900.1	Wheat	nucleus	38.97	19.49

Protein Annotations

EnsemblPlants:TraesCS2B01G178000.1	EnsemblPlantsGene:TraesCS2B01G178000	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF601	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:153126356..153127211

Molecular Weight (calculated)

22113.5 Da

IEP (calculated)

10.895

GRAVY (calculated)

-0.781

Length

195 amino acids

Sequence
(BLAST)

001: MSKWPGATKK RLKRGLWSPE EDEKLMNHVA QYGYGCWSSV AKIAGLERCG KSCRLRWMNY LTTGRGGAFS QEEEDFIIHL HSIRGNKWSQ IAAHLPGRTD
101: NEVKNFWNSF IKKKLRQRGI DPATHEHKPL DPAAPAAPAT PVSRNAVFSE NELILSSPVG GPHMPPLVSA ESYVYSRGQH GRRRRCARRG RRVQR

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.