Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G365900.1 | Wheat | nucleus | 90.16 | 92.59 |
| TraesCS1D01G371500.1 | Wheat | nucleus | 89.18 | 91.28 |
| TraesCS1B01G383700.1 | Wheat | nucleus | 83.93 | 87.37 |
| TraesCS1D01G371700.1 | Wheat | nucleus | 82.95 | 86.35 |
| TraesCS1B01G383800.1 | Wheat | nucleus | 79.67 | 84.38 |
| TraesCS1B01G383900.1 | Wheat | nucleus | 78.36 | 82.7 |
| Zm00001d009435_P001 | Maize | nucleus | 57.7 | 69.57 |
| TraesCS3B01G286500.1 | Wheat | nucleus | 63.61 | 69.04 |
| Os05t0543600-01 | Rice | nucleus | 70.49 | 68.91 |
| EES18602 | Sorghum | nucleus | 70.82 | 67.08 |
| HORVU1Hr1G079040.4 | Barley | nucleus, plastid | 74.43 | 64.49 |
| TraesCS2B01G178000.1 | Wheat | nucleus | 30.16 | 47.18 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 42.62 | 41.94 |
| PGSC0003DMT400069644 | Potato | nucleus | 39.67 | 38.41 |
| Solyc06g071690.2.1 | Tomato | nucleus | 40.0 | 38.01 |
| TraesCS7B01G244200.1 | Wheat | nucleus | 35.74 | 37.59 |
| TraesCS4B01G312100.1 | Wheat | nucleus | 30.82 | 36.02 |
| VIT_17s0000g09080.t01 | Wine grape | nucleus | 42.62 | 35.81 |
| Solyc03g112390.2.1 | Tomato | nucleus | 37.7 | 35.38 |
| PGSC0003DMT400046645 | Potato | nucleus | 37.7 | 35.38 |
| KRH63612 | Soybean | nucleus | 41.31 | 35.1 |
| KRH57123 | Soybean | nucleus | 42.3 | 34.86 |
| KRH54334 | Soybean | nucleus | 40.66 | 34.07 |
| KRH03235 | Soybean | nucleus | 40.33 | 33.98 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 34.43 | 33.87 |
| TraesCS3B01G280700.1 | Wheat | nucleus | 30.82 | 32.87 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 29.18 | 32.48 |
| TraesCS2B01G177900.1 | Wheat | nucleus | 38.03 | 32.13 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 28.2 | 31.39 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 28.85 | 31.1 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 28.2 | 30.82 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 27.54 | 29.58 |
| TraesCS6B01G265200.1 | Wheat | nucleus | 28.52 | 29.49 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 40.66 | 28.77 |
| TraesCS7B01G204800.1 | Wheat | nucleus | 31.48 | 27.83 |
| TraesCS6B01G053100.1 | Wheat | nucleus | 27.87 | 27.6 |
| TraesCS2B01G252000.1 | Wheat | nucleus | 33.11 | 26.44 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 33.77 | 26.41 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G383600.1 | EnsemblPlantsGene:TraesCS1B01G383600 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF597 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:615581632..615582967
Molecular Weight (calculated)
33139.7 Da
IEP (calculated)
4.721
GRAVY (calculated)
-0.442
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPSSCGVG QPKLRKGLWS PEEDEKLYNH IIRHGVGCWS SVPRLAGLNR CGKSCRLRWI NYLRPDLKRG CFSQQEEDHI VALHQILGNR WSQIASHLPG
101: RTDNEIKNFW NSCIKKKLRQ QGIDPATHKP MGTADTATAA LPDTEGEDSK PLTAAADGSL APKQSAVFDP FPVCADYGAG FADDLGAANA AALYGQLCGG
201: KEGADEDAGF GAADYSCVLD VPENLGYGES SSNSSNRSYG GEVGSMLDGE VGSVLDGEVL YLAKAEPAFA EMERQHDVLL EYEFSLPCQE QSLLANFEFN
301: LEHYF
101: RTDNEIKNFW NSCIKKKLRQ QGIDPATHKP MGTADTATAA LPDTEGEDSK PLTAAADGSL APKQSAVFDP FPVCADYGAG FADDLGAANA AALYGQLCGG
201: KEGADEDAGF GAADYSCVLD VPENLGYGES SSNSSNRSYG GEVGSMLDGE VGSVLDGEVL YLAKAEPAFA EMERQHDVLL EYEFSLPCQE QSLLANFEFN
301: LEHYF
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.