Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03235 | Soybean | nucleus | 93.24 | 95.3 |
| KRH63612 | Soybean | nucleus | 73.24 | 75.49 |
| KRH54334 | Soybean | nucleus | 72.7 | 73.9 |
| VIT_17s0000g09080.t01 | Wine grape | nucleus | 58.92 | 60.06 |
| PGSC0003DMT400046645 | Potato | nucleus | 49.19 | 56.0 |
| PGSC0003DMT400069644 | Potato | nucleus | 46.76 | 54.92 |
| Solyc03g112390.2.1 | Tomato | nucleus | 48.11 | 54.77 |
| Solyc06g071690.2.1 | Tomato | nucleus | 45.41 | 52.34 |
| TraesCS3B01G286500.1 | Wheat | nucleus | 35.95 | 47.33 |
| TraesCS3D01G255400.1 | Wheat | nucleus | 35.95 | 46.67 |
| GSMUA_Achr3P28540_001 | Banana | nucleus | 38.11 | 45.93 |
| TraesCS1D01G371900.1 | Wheat | nucleus | 33.78 | 44.48 |
| Os01t0702700-01 | Rice | nucleus | 35.95 | 44.19 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 37.57 | 44.13 |
| TraesCS1D01G371700.1 | Wheat | nucleus | 34.86 | 44.03 |
| TraesCS1B01G383700.1 | Wheat | nucleus | 34.86 | 44.03 |
| TraesCS1A01G366100.1 | Wheat | nucleus | 34.32 | 43.49 |
| TraesCS1D01G371800.1 | Wheat | nucleus | 34.05 | 43.45 |
| Zm00001d009435_P001 | Maize | nucleus | 29.46 | 43.08 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 35.41 | 42.81 |
| TraesCS1B01G383800.1 | Wheat | nucleus | 33.24 | 42.71 |
| TraesCS1A01G366200.1 | Wheat | nucleus | 34.05 | 42.57 |
| TraesCS1A01G365900.1 | Wheat | nucleus | 34.05 | 42.42 |
| TraesCS3A01G200300.1 | Wheat | nucleus | 34.59 | 42.38 |
| TraesCS1B01G383600.1 | Wheat | nucleus | 34.86 | 42.3 |
| TraesCS1B01G383900.1 | Wheat | nucleus | 32.97 | 42.21 |
| TraesCS3A01G254500.1 | Wheat | nucleus | 35.95 | 42.09 |
| Os05t0543600-01 | Rice | nucleus | 35.41 | 41.99 |
| EES18602 | Sorghum | nucleus | 36.49 | 41.93 |
| TraesCS1A01G366300.1 | Wheat | nucleus | 32.7 | 41.87 |
| EES03490 | Sorghum | nucleus | 35.41 | 41.72 |
| Zm00001d038878_P001 | Maize | nucleus | 36.22 | 41.61 |
| TraesCS1D01G371400.1 | Wheat | nucleus | 34.05 | 41.58 |
| TraesCS1A01G366000.1 | Wheat | nucleus | 31.35 | 41.43 |
| TraesCS1D01G371500.1 | Wheat | nucleus | 33.24 | 41.28 |
| HORVU3Hr1G047290.2 | Barley | nucleus | 33.78 | 41.25 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 33.78 | 40.98 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 34.32 | 40.97 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 31.35 | 37.42 |
| Zm00001d043729_P001 | Maize | nucleus | 22.97 | 37.12 |
| EES03100 | Sorghum | nucleus | 34.05 | 36.95 |
| Zm00001d011669_P001 | Maize | nucleus | 23.51 | 36.25 |
| KRG90431 | Soybean | nucleus | 41.35 | 35.75 |
| EES02393 | Sorghum | nucleus | 26.76 | 35.36 |
| KRH33726 | Soybean | nucleus | 40.54 | 34.97 |
| KRH68350 | Soybean | nucleus | 39.46 | 34.93 |
| HORVU1Hr1G079040.4 | Barley | nucleus, plastid | 32.97 | 34.66 |
| KRH68389 | Soybean | nucleus | 38.65 | 34.21 |
| KRH20828 | Soybean | nucleus | 28.38 | 33.76 |
| KRH69136 | Soybean | nucleus | 39.46 | 33.64 |
| EES07893 | Sorghum | nucleus | 22.97 | 33.6 |
| KRH33667 | Soybean | nucleus | 41.35 | 33.55 |
| KRH13791 | Soybean | nucleus | 29.46 | 33.54 |
| KRG96660 | Soybean | nucleus | 39.19 | 33.41 |
| KRH27485 | Soybean | nucleus | 28.38 | 33.33 |
| KRH41236 | Soybean | nucleus | 28.92 | 33.33 |
| KRH27893 | Soybean | nucleus | 29.19 | 33.23 |
| KRH77586 | Soybean | nucleus | 29.19 | 33.13 |
| KRG93751 | Soybean | nucleus | 29.73 | 32.74 |
| KRH43663 | Soybean | nucleus | 28.92 | 32.72 |
| KRH44125 | Soybean | nucleus | 30.81 | 32.66 |
| Zm00001d039700_P001 | Maize | nucleus | 21.08 | 32.64 |
| KRH47101 | Soybean | nucleus | 30.81 | 32.39 |
| KRH35334 | Soybean | nucleus | 23.51 | 32.22 |
| KRH23131 | Soybean | nucleus | 28.65 | 32.02 |
| OQU86237 | Sorghum | nucleus | 23.24 | 31.97 |
| KRH10204 | Soybean | nucleus | 28.65 | 31.74 |
| Zm00001d005055_P001 | Maize | nucleus | 19.46 | 31.72 |
| KRH18309 | Soybean | nucleus | 29.19 | 31.67 |
| KRH59965 | Soybean | nucleus | 27.3 | 31.56 |
| KRH10036 | Soybean | nucleus | 30.0 | 31.44 |
| KRH09018 | Soybean | nucleus | 24.59 | 31.27 |
| KRH24713 | Soybean | nucleus | 28.38 | 31.25 |
| Zm00001d008695_P001 | Maize | nucleus | 22.97 | 30.69 |
| KRH38485 | Soybean | nucleus | 23.78 | 30.24 |
| KRH29717 | Soybean | nucleus | 27.57 | 30.0 |
| KRG96619 | Soybean | plastid, vacuole | 39.73 | 29.7 |
| TraesCS3A01G094300.1 | Wheat | nucleus | 22.16 | 29.5 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 22.43 | 29.23 |
| TraesCS3D01G094500.1 | Wheat | nucleus | 22.43 | 29.12 |
| HORVU3Hr1G016940.1 | Barley | nucleus | 22.16 | 28.67 |
| KRG91494 | Soybean | nucleus | 23.24 | 25.83 |
| HORVU1Hr1G079030.2 | Barley | nucleus | 23.24 | 18.14 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100811140 | MapMan:15.5.2.1 | UniProt:A0A0R0JXT1 | EMBL:ACUP02002814 | EnsemblPlantsGene:GLYMA_05G040700 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| EnsemblPlants:KRH57123 | ProteinID:KRH57123 | ProteinID:KRH57123.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF466 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000189D447 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:3670313..3672199
Molecular Weight (calculated)
41316.4 Da
IEP (calculated)
6.241
GRAVY (calculated)
-0.511
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCVKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT
101: DNEIKNFWNS CLKKKLLKQG IDPSTHKPLT EAHVKEEKKI IETSPMQTPL SQGPSVPLIF PSSQGSSLLI SDSSYYDGGL TEASREIFMT KPALDPLSYY
201: DFPMGVAQSG FNLPVSQYQT SLKASDQNPF GPNSSYVFSS MPSLTNSDHG NVSVTEFSDN NSASKISSLF MNDQVKESSS NSSNLSTIYH GGGCHISSMM
301: ENAGFSWEGD NKFDPLFQFQ VNATKSEDFK TSSWEEGQLH TQNSIDFTSF PLTSLSEDLT GANFDVFQHI
101: DNEIKNFWNS CLKKKLLKQG IDPSTHKPLT EAHVKEEKKI IETSPMQTPL SQGPSVPLIF PSSQGSSLLI SDSSYYDGGL TEASREIFMT KPALDPLSYY
201: DFPMGVAQSG FNLPVSQYQT SLKASDQNPF GPNSSYVFSS MPSLTNSDHG NVSVTEFSDN NSASKISSLF MNDQVKESSS NSSNLSTIYH GGGCHISSMM
301: ENAGFSWEGD NKFDPLFQFQ VNATKSEDFK TSSWEEGQLH TQNSIDFTSF PLTSLSEDLT GANFDVFQHI
001: MKRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLERCG KSCRLRWINY LRPDLKRGAF SSEEQNLIVE LHAVLGNRWS QIAARLPGRT
101: DNEIKNLWNS CIKKKLMKKG IDPITHKPLS EVGKETNRSD NNNSTSFSSE TNQDLFVKKT SDFAEYSAFQ KEESNSVSLR NSLSSMIPTQ FNIDDGSVSN
201: AGFDTQVCVK PSIILLPPPN NTSSTVSGQD HVNVSEPNWE SNSGTTSHLN NPGMEEMKWS EEYLNESLFS TQVYVKSETD FNSNIAFPWS QSQACDVFPK
301: DLQRMAFSFG GQTL
101: DNEIKNLWNS CIKKKLMKKG IDPITHKPLS EVGKETNRSD NNNSTSFSSE TNQDLFVKKT SDFAEYSAFQ KEESNSVSLR NSLSSMIPTQ FNIDDGSVSN
201: AGFDTQVCVK PSIILLPPPN NTSSTVSGQD HVNVSEPNWE SNSGTTSHLN NPGMEEMKWS EEYLNESLFS TQVYVKSETD FNSNIAFPWS QSQACDVFPK
301: DLQRMAFSFG GQTL
Arabidopsis Description
AtMYB50At1g57560 [Source:UniProtKB/TrEMBL;Acc:Q9C695]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.