Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69136 | Soybean | nucleus | 90.35 | 94.93 |
| KRH68350 | Soybean | nucleus | 66.45 | 72.49 |
| KRG96619 | Soybean | plastid, vacuole | 66.89 | 61.62 |
| VIT_07s0005g02480.t01 | Wine grape | nucleus | 55.7 | 56.32 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 33.77 | 54.42 |
| GSMUA_Achr11P... | Banana | nucleus | 27.41 | 53.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.24 | 53.45 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 34.43 | 51.14 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 35.96 | 49.1 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 36.18 | 47.97 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 37.94 | 47.4 |
| PGSC0003DMT400040774 | Potato | nucleus | 41.67 | 46.68 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 36.84 | 46.67 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 37.5 | 46.22 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 36.18 | 45.83 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 37.5 | 45.6 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 34.21 | 45.48 |
| Solyc10g044680.1.1 | Tomato | nucleus | 39.47 | 45.23 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 36.62 | 43.83 |
| KRH33726 | Soybean | nucleus | 40.79 | 43.36 |
| PGSC0003DMT400047076 | Potato | nucleus | 40.13 | 42.96 |
| Solyc01g102340.2.1 | Tomato | nucleus | 40.13 | 42.96 |
| KRG96660 | Soybean | nucleus | 40.35 | 42.4 |
| KRH68389 | Soybean | nucleus | 38.82 | 42.34 |
| KRG90431 | Soybean | nucleus | 39.25 | 41.82 |
| Bra036317.1-P | Field mustard | nucleus | 30.7 | 41.67 |
| CDY07124 | Canola | nucleus | 30.7 | 41.67 |
| CDY58217 | Canola | nucleus | 30.7 | 41.67 |
| KRH57123 | Soybean | nucleus | 33.55 | 41.35 |
| KRH63612 | Soybean | nucleus | 32.24 | 40.95 |
| KRH54334 | Soybean | nucleus | 32.68 | 40.93 |
| GSMUA_Achr11P... | Banana | nucleus | 33.33 | 40.53 |
| KRH03235 | Soybean | nucleus | 32.02 | 40.33 |
| AT4G01680.2 | Thale cress | nucleus | 30.7 | 40.23 |
| KRH43663 | Soybean | nucleus | 26.54 | 37.0 |
| KRH13791 | Soybean | nucleus | 25.66 | 36.0 |
| KRH35334 | Soybean | nucleus | 21.27 | 35.93 |
| KRH27893 | Soybean | nucleus | 25.22 | 35.38 |
| KRH77586 | Soybean | nucleus | 24.78 | 34.66 |
| KRH41236 | Soybean | nucleus | 24.34 | 34.58 |
| KRH10036 | Soybean | nucleus | 26.75 | 34.56 |
| KRH59965 | Soybean | nucleus | 23.9 | 34.06 |
| KRH24713 | Soybean | nucleus | 25.0 | 33.93 |
| KRH20828 | Soybean | nucleus | 23.03 | 33.76 |
| KRH09018 | Soybean | nucleus | 21.49 | 33.68 |
| KRH38485 | Soybean | nucleus | 21.27 | 33.33 |
| KRH27485 | Soybean | nucleus | 23.03 | 33.33 |
| KRG93751 | Soybean | nucleus | 24.34 | 33.04 |
| KRH44125 | Soybean | nucleus | 25.22 | 32.95 |
| KRH18309 | Soybean | nucleus | 24.56 | 32.84 |
| KRH47101 | Soybean | nucleus | 25.22 | 32.67 |
| KRH29717 | Soybean | nucleus | 23.9 | 32.06 |
| KRH23131 | Soybean | nucleus | 22.81 | 31.42 |
| KRH10204 | Soybean | nucleus | 22.81 | 31.14 |
| KRG91494 | Soybean | nucleus | 21.27 | 29.13 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100815881 | MapMan:15.5.2.1 | EMBL:ACUP02006550 | EnsemblPlantsGene:GLYMA_10G139000 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1LAU6 | InterPro:IPR017930 | EnsemblPlants:KRH33667 |
| ProteinID:KRH33667 | ProteinID:KRH33667.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF465 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00023CD8AE | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:+:37289714..37292119
Molecular Weight (calculated)
51203.5 Da
IEP (calculated)
7.209
GRAVY (calculated)
-0.766
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRQKG IDPVTHKPLS EVENGEDNGR SQEKAPEVSN ELNLLKSESS KSDSASYEQR TSISPKAYAP EVDGSCSSKI ESNFVTNNNC
201: YSKDLFLDRF MSSSSSRQES YTNSCQPLDL MGNFPIQMSY ATNDHSLPND SNSGHWFSQT GRPFDMNSDQ FPFNAVATSI NPTPTSTTNL FLPNNSFCYK
301: PSSLAVPSDS VSTPYGSHYW EASASNNSNS SIRSNSSTEL RSSSPLNNIF SSWGLADCSI STTTTKEAQI HMMENHNTEE PKWDEYLHNP ISMLASSVQN
401: QAPESLCNEI KTSMHLVPDT LGAMLPHIHT KQHEQSQTSS FFSKDIQKLR AAFGHM
101: DNEIKNLWNS CLKKKLRQKG IDPVTHKPLS EVENGEDNGR SQEKAPEVSN ELNLLKSESS KSDSASYEQR TSISPKAYAP EVDGSCSSKI ESNFVTNNNC
201: YSKDLFLDRF MSSSSSRQES YTNSCQPLDL MGNFPIQMSY ATNDHSLPND SNSGHWFSQT GRPFDMNSDQ FPFNAVATSI NPTPTSTTNL FLPNNSFCYK
301: PSSLAVPSDS VSTPYGSHYW EASASNNSNS SIRSNSSTEL RSSSPLNNIF SSWGLADCSI STTTTKEAQI HMMENHNTEE PKWDEYLHNP ISMLASSVQN
401: QAPESLCNEI KTSMHLVPDT LGAMLPHIHT KQHEQSQTSS FFSKDIQKLR AAFGHM
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLRYIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEENLIIE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRLRG IDPVTHKLLT EIETGTDDKT KPVEKSQQTY LVETDGSSST TTCSTNQNNN TDHLYTGNFG FQRLSLENGS RIAAGSDLGI
201: WIPQTGRNHH HHVDETIPSA VVLPGSMFSS GLTGYRSSNL GLIELENSFS TGPMMTEHQQ IQESNYNNST FFGNGNLNWG LTMEENQNPF TISNHSNSSL
301: YSDIKSETNF FGTEATNVGM WPCNQLQPQQ HAYGHI
101: DNEIKNLWNS CLKKKLRLRG IDPVTHKLLT EIETGTDDKT KPVEKSQQTY LVETDGSSST TTCSTNQNNN TDHLYTGNFG FQRLSLENGS RIAAGSDLGI
201: WIPQTGRNHH HHVDETIPSA VVLPGSMFSS GLTGYRSSNL GLIELENSFS TGPMMTEHQQ IQESNYNNST FFGNGNLNWG LTMEENQNPF TISNHSNSSL
301: YSDIKSETNF FGTEATNVGM WPCNQLQPQQ HAYGHI
Arabidopsis Description
MYB55Myb domain protein 55 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.