Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G26660.1 | KRH01133 | AT3G28715.1 | 21798944 |
| AT5G26660.1 | KRH40128 | AT3G28715.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008206_P001 | Maize | nucleus | 15.62 | 91.78 |
| KRG90431 | Soybean | nucleus | 88.11 | 88.32 |
| CDY05331 | Canola | nucleus | 27.04 | 87.88 |
| CDY05516 | Canola | nucleus | 26.81 | 87.12 |
| KRG96660 | Soybean | nucleus | 61.07 | 60.37 |
| KRH68389 | Soybean | nucleus | 58.04 | 59.57 |
| GSMUA_Achr11P... | Banana | nucleus | 31.0 | 57.08 |
| CDX93504 | Canola | nucleus | 38.93 | 56.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.9 | 56.0 |
| CDY06359 | Canola | nucleus | 39.63 | 55.19 |
| CDY50901 | Canola | nucleus | 38.46 | 55.18 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 36.36 | 55.12 |
| CDY22635 | Canola | nucleus | 39.63 | 55.02 |
| Bra020016.1-P | Field mustard | nucleus | 41.96 | 54.22 |
| Bra031669.1-P | Field mustard | nucleus | 40.56 | 53.21 |
| AT1G57560.1 | Thale cress | nucleus | 38.93 | 53.18 |
| CDY32188 | Canola | nucleus | 40.33 | 51.49 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 52.68 | 51.48 |
| Bra030783.1-P | Field mustard | nucleus | 40.33 | 50.14 |
| CDY31082 | Canola | nucleus | 40.33 | 50.0 |
| AT1G09540.1 | Thale cress | nucleus | 41.96 | 49.18 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 34.97 | 48.86 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 38.93 | 48.55 |
| Zm00001d040527_P001 | Maize | nucleus | 31.47 | 48.04 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 39.86 | 47.5 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 36.83 | 47.31 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 37.76 | 47.23 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 40.09 | 47.12 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 40.56 | 47.03 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 39.39 | 46.94 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 40.09 | 45.87 |
| PGSC0003DMT400040774 | Potato | nucleus | 43.36 | 45.7 |
| PGSC0003DMT400047076 | Potato | nucleus | 44.52 | 44.84 |
| Solyc01g102340.2.1 | Tomato | nucleus | 44.52 | 44.84 |
| Solyc10g044680.1.1 | Tomato | nucleus | 41.26 | 44.47 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 39.16 | 44.09 |
| GSMUA_Achr11P... | Banana | nucleus | 38.46 | 44.0 |
| Os05t0140100-01 | Rice | nucleus | 43.59 | 43.79 |
| Zm00001d024784_P001 | Maize | nucleus | 26.11 | 43.75 |
| EES02806 | Sorghum | nucleus | 43.36 | 43.56 |
| Bra036588.1-P | Field mustard | nucleus | 33.8 | 43.28 |
| CDX87038 | Canola | nucleus | 34.03 | 43.2 |
| Zm00001d010907_P001 | Maize | nucleus | 42.89 | 43.19 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 43.12 | 43.12 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 43.12 | 43.12 |
| KRH68350 | Soybean | nucleus | 41.96 | 43.06 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 43.12 | 43.02 |
| CDY68301 | Canola | nucleus | 33.57 | 42.99 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 43.12 | 42.92 |
| AT5G26660.1 | Thale cress | nucleus | 35.2 | 42.9 |
| KRH69136 | Soybean | nucleus | 43.12 | 42.63 |
| OQU77376 | Sorghum | nucleus | 42.66 | 42.56 |
| Os01t0285300-01 | Rice | nucleus | 42.42 | 42.52 |
| CDX88230 | Canola | nucleus | 34.97 | 42.13 |
| CDX80576 | Canola | nucleus | 34.97 | 42.02 |
| KRH33667 | Soybean | nucleus | 43.36 | 40.79 |
| KRH63612 | Soybean | nucleus | 34.03 | 40.67 |
| KRH57123 | Soybean | nucleus | 34.97 | 40.54 |
| KRH03235 | Soybean | nucleus | 33.1 | 39.23 |
| KRH54334 | Soybean | nucleus | 33.1 | 39.01 |
| Bra009910.1-P | Field mustard | nucleus | 28.21 | 36.67 |
| KRG96619 | Soybean | plastid, vacuole | 42.19 | 36.57 |
| KRH35334 | Soybean | nucleus | 22.61 | 35.93 |
| KRH41236 | Soybean | nucleus | 26.11 | 34.89 |
| KRH43663 | Soybean | nucleus | 26.34 | 34.56 |
| KRH27893 | Soybean | nucleus | 25.87 | 34.15 |
| KRH20828 | Soybean | nucleus | 24.71 | 34.08 |
| KRH09018 | Soybean | nucleus | 23.08 | 34.02 |
| KRH13791 | Soybean | nucleus | 25.41 | 33.54 |
| KRH59965 | Soybean | nucleus | 24.94 | 33.44 |
| KRH77586 | Soybean | nucleus | 25.41 | 33.44 |
| KRH44125 | Soybean | nucleus | 27.04 | 33.24 |
| KRH47101 | Soybean | nucleus | 27.04 | 32.95 |
| KRH38485 | Soybean | nucleus | 22.14 | 32.65 |
| KRG93751 | Soybean | nucleus | 25.41 | 32.44 |
| KRH27485 | Soybean | nucleus | 23.78 | 32.38 |
| Bra020526.1-P | Field mustard | nucleus | 32.63 | 31.82 |
| KRH18309 | Soybean | nucleus | 25.17 | 31.67 |
| KRH10036 | Soybean | nucleus | 25.87 | 31.44 |
| KRH24713 | Soybean | nucleus | 24.01 | 30.65 |
| KRH29717 | Soybean | nucleus | 24.01 | 30.29 |
| KRH23131 | Soybean | nucleus | 23.31 | 30.21 |
| KRH10204 | Soybean | nucleus | 23.31 | 29.94 |
| KRG91494 | Soybean | nucleus | 22.84 | 29.43 |
| CDY05517 | Canola | plastid | 4.9 | 12.28 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100790184 | MapMan:15.5.2.1 | EMBL:ACUP02006552 | EnsemblPlantsGene:GLYMA_10G142200 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1LAY2 | InterPro:IPR017930 | ProteinID:KRH33725.1 |
| EnsemblPlants:KRH33726 | ProteinID:KRH33726 | ProteinID:KRH33726.1 | EMBL:KT031195 | InterPro:Myb_dom | PFAM:PF00249 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF885 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0001B36E2D | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:37648395..37652608
Molecular Weight (calculated)
48315.4 Da
IEP (calculated)
7.206
GRAVY (calculated)
-0.738
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLNHIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQQEENMIVE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRQRG IDPTTHKPLS EVENDKDMNM MPPSTDKSTQ KASVGSNEVV SNLVDHHQPP KTMPNSSSER YPLEVSTTSS TQELFLDRFG
201: TTTTTCHENN NNTSDLVGSY FSFQHLNYGT TTSMALSSNP NTSLCFILPS TSSDINNNNS IITSSSMLPS IFPTQHVKLQ SNNNNPSSIS SDGVQNWETS
301: NNTNKNNGNM QLQSSTNYLD STWGVAESMK IVNINKEAQV VPLQAEQEDL KWSEYLNTPF ILGNNTTQNH QIQTSQSIYT EVIKPETGFI IDESCTSNWH
401: HHQPPPAFQL SDIYSKDLQR FSVTFGQTL
101: DNEIKNLWNS CLKKKLRQRG IDPTTHKPLS EVENDKDMNM MPPSTDKSTQ KASVGSNEVV SNLVDHHQPP KTMPNSSSER YPLEVSTTSS TQELFLDRFG
201: TTTTTCHENN NNTSDLVGSY FSFQHLNYGT TTSMALSSNP NTSLCFILPS TSSDINNNNS IITSSSMLPS IFPTQHVKLQ SNNNNPSSIS SDGVQNWETS
301: NNTNKNNGNM QLQSSTNYLD STWGVAESMK IVNINKEAQV VPLQAEQEDL KWSEYLNTPF ILGNNTTQNH QIQTSQSIYT EVIKPETGFI IDESCTSNWH
401: HHQPPPAFQL SDIYSKDLQR FSVTFGQTL
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.