Factsheet for Bra030783.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31082	Canola	nucleus	98.84	98.55
CDY32188	Canola	nucleus	92.46	94.94
Zm00001d008206_P001	Maize	nucleus	19.13	90.41
Bra020016.1-P	Field mustard	nucleus	80.58	83.73
AT1G09540.1	Thale cress	nucleus	87.54	82.51
Bra031669.1-P	Field mustard	nucleus	54.2	57.19
GSMUA_Achr11P...	Banana	nucleus	36.23	53.65
GSMUA_AchrUn_...	Banana	nucleus	40.58	50.91
GSMUA_Achr4P19560_001	Banana	nucleus	37.97	46.29
Zm00001d024784_P001	Maize	nucleus	33.62	45.31
GSMUA_Achr2P01830_001	Banana	nucleus	39.71	44.63
Zm00001d040527_P001	Maize	nucleus	35.07	43.06
GSMUA_Achr7P17250_001	Banana	nucleus	42.03	42.27
GSMUA_Achr3P24580_001	Banana	nucleus	41.74	41.86
Os05t0140100-01	Rice	nucleus	51.59	41.69
OQU77376	Sorghum	nucleus	51.59	41.4
GSMUA_Achr1P25120_001	Banana	nucleus	42.9	41.11
GSMUA_Achr8P18730_001	Banana	nucleus	44.06	41.08
Zm00001d010907_P001	Maize	nucleus	50.72	41.08
Os01t0285300-01	Rice	nucleus	50.72	40.89
TraesCS1D01G084400.1	Wheat	nucleus	50.72	40.79
HORVU1Hr1G017970.4	Barley	nucleus	50.72	40.79
EES02806	Sorghum	nucleus	50.43	40.75
TraesCS1A01G083100.2	Wheat	nucleus	50.72	40.7
TraesCS1B01G100600.1	Wheat	nucleus	50.72	40.6
KRH33726	Soybean	nucleus	50.14	40.33
GSMUA_Achr2P18440_001	Banana	nucleus	42.61	40.27
KRG90431	Soybean	nucleus	49.86	40.19
GSMUA_Achr1P18990_001	Banana	nucleus	38.84	40.12
Bra036588.1-P	Field mustard	nucleus	38.84	40.0
Bra036317.1-P	Field mustard	nucleus	38.55	39.58
KRH68389	Soybean	nucleus	47.83	39.47
GSMUA_Achr5P18400_001	Banana	nucleus	42.9	39.47
GSMUA_Achr3P12200_001	Banana	nucleus	41.16	39.44
VIT_14s0060g00240.t01	Wine grape	nucleus	50.14	39.41
GSMUA_Achr2P07930_001	Banana	nucleus	42.9	38.85
KRG96660	Soybean	nucleus	48.12	38.25
Bra013900.1-P	Field mustard	nucleus	23.77	38.14
GSMUA_Achr11P...	Banana	nucleus	41.16	37.87
Solyc10g044680.1.1	Tomato	nucleus	43.48	37.69
PGSC0003DMT400040774	Potato	nucleus	44.06	37.35
Solyc01g102340.2.1	Tomato	nucleus	45.8	37.09
PGSC0003DMT400047076	Potato	nucleus	45.8	37.09
Bra029129.1-P	Field mustard	nucleus	26.09	33.71
Bra008875.1-P	Field mustard	nucleus	27.25	33.57
Bra039339.1-P	Field mustard	nucleus	28.41	33.33
Bra006166.1-P	Field mustard	nucleus	26.96	33.21
Bra034738.1-P	Field mustard	nucleus	28.12	32.99
Bra009910.1-P	Field mustard	nucleus	30.72	32.12
Bra018027.1-P	Field mustard	nucleus	23.19	31.01
Bra020526.1-P	Field mustard	nucleus	38.55	30.23
Bra021515.1-P	Field mustard	nucleus	30.72	29.78
Bra029696.1-P	Field mustard	nucleus	28.41	29.43
Bra027771.1-P	Field mustard	nucleus	29.86	28.14
Bra001284.1-P	Field mustard	nucleus	27.54	27.94
Bra027389.1-P	Field mustard	nucleus	28.12	27.87
Bra027668.1-P	Field mustard	nucleus	29.57	27.64
Bra023380.1-P	Field mustard	nucleus	11.88	19.71
Bra019154.1-P	Field mustard	nucleus	25.22	18.87

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra030783	EnsemblPlants:Bra030783.1	EnsemblPlants:Bra030783.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009733
GO:GO:0009791	GO:GO:0009987	GO:GO:0010087	GO:GO:0010089	GO:GO:0010119	GO:GO:0010214
GO:GO:0048364	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4EPR2	InterPro:Myb_dom	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF910	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI00025467C5	SEG:seg	:	:	:	:

Description

AT1G57560 (E=2e-089) AtMYB50 | AtMYB50 (myb domain protein 50); DNA binding / transcription factor

Coordinates

chrA08:-:20380884..20382104

Molecular Weight (calculated)

38783.9 Da

IEP (calculated)

8.074

GRAVY (calculated)

-0.752

Length

345 amino acids

Sequence
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLNHIT HHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHSVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EADNDKPTRS SNDLKSPSSS AATNQDFFLE RPSDFSDYFG LQKLNFNSNL TPESSMCSIV PGQFSPGNMV
201: GSVFQTPVCV KPSISLPTDN SSSTVSRGDH AGSNWEFQTN NTSNFFENSG FSWSIPSSSV TKPNHNFEEV KWSDYLNTPF FNSSTVQSQN SQQIYIKSEA
301: EYLAKVSNIT DPWSQSQNEN LSTPEASDVF SKDLQRMAVS FGQSL

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.