Factsheet for Bra029696.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35982	Canola	nucleus	100.0	99.4
CDY27999	Canola	nucleus	96.7	96.12
Bra001284.1-P	Field mustard	nucleus	86.49	84.71
AT3G08500.1	Thale cress	nucleus	84.98	82.51
KRH20828	Soybean	nucleus	48.35	51.77
KRH27485	Soybean	nucleus	48.95	51.75
KRG93751	Soybean	nucleus	49.25	48.81
GSMUA_Achr8P31350_001	Banana	nucleus	40.54	48.39
KRH18309	Soybean	nucleus	48.65	47.51
VIT_13s0064g00960.t01	Wine grape	nucleus	40.54	46.71
GSMUA_Achr2P07780_001	Banana	nucleus	40.24	45.12
GSMUA_AchrUn_...	Banana	nucleus	37.84	44.52
PGSC0003DMT400018995	Potato	nucleus	46.25	43.87
Solyc11g065840.1.1	Tomato	nucleus	46.25	43.63
Bra008875.1-P	Field mustard	nucleus	36.34	43.21
Bra006166.1-P	Field mustard	nucleus	35.14	41.79
Bra013900.1-P	Field mustard	nucleus	22.22	34.42
Bra023380.1-P	Field mustard	nucleus	18.92	30.29
Bra031669.1-P	Field mustard	nucleus	29.43	29.97
Bra034738.1-P	Field mustard	nucleus	25.53	28.91
Bra039339.1-P	Field mustard	nucleus	25.53	28.91
Bra029129.1-P	Field mustard	nucleus	23.12	28.84
Bra036588.1-P	Field mustard	nucleus	28.83	28.66
Bra020016.1-P	Field mustard	nucleus	28.53	28.61
Bra030783.1-P	Field mustard	nucleus	29.43	28.41
Bra018027.1-P	Field mustard	nucleus	21.62	27.91
Bra036317.1-P	Field mustard	nucleus	26.73	26.49
Bra021515.1-P	Field mustard	nucleus	27.63	25.84
Bra027389.1-P	Field mustard	nucleus	25.53	24.43
Bra027771.1-P	Field mustard	nucleus	26.43	24.04
Bra027668.1-P	Field mustard	nucleus	25.53	23.04
Bra009910.1-P	Field mustard	nucleus	22.82	23.03
Bra020526.1-P	Field mustard	nucleus	29.13	22.05
Bra019154.1-P	Field mustard	nucleus	22.52	16.27

Protein Annotations

EnsemblPlants:Bra029696.1	EnsemblPlants:Bra029696.1-P	EnsemblPlantsGene:Bra029696	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF888	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002547DE8	UniProt:M4ELM8	MapMan:15.5.2.1	:	:

Description

AT3G08500 (E=1e-137) MYB83, AtMYB83 | MYB83 (myb domain protein 83); DNA binding / transcription factor

Coordinates

chrA05:+:22618390..22619621

Molecular Weight (calculated)

37288.5 Da

IEP (calculated)

5.635

GRAVY (calculated)

-0.717

Length

333 amino acids

Sequence
(BLAST)

001: MRNQDITTIR DKNKANNACG GNNNKPKLRK GLWSPDEDEK LIRYMLTNGQ GCWSDIARNA GLLRCGKSCR LRWINYLRPD LKRGSFSPQE EDLIFHLHSI
101: LGNRWSQIAT RLPGRTDNEI KNFWNSTLKK RLKNNNTSSG SSPNNSNSNS LEPIDQQVDM GGNSNPMMNS YHHQDDMMIV GNTMHMDSSS FYAPVVSGVG
201: LNQLDPLISV PDHSRYQQMG NTGNNNVNGL GDYGSAVLDP ISNRASVENE WFLPPSENTN GIACATSNNL NLEALDLCFS SKNMCHSESF KVGNIMGMEN
301: SSWEIENPKI GDWDLDSLID NNSSFPFLDF QVE

Best Arabidopsis Sequence Match ( AT3G08500.1 )
(BLAST)

001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD

Arabidopsis Description

MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.