Factsheet for AT3G08500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35982	Canola	nucleus	83.09	85.07
Bra029696.1-P	Field mustard	nucleus	82.51	84.98
CDY27999	Canola	nucleus	82.22	84.18
CDX74013	Canola	nucleus	82.22	82.94
Bra001284.1-P	Field mustard	nucleus	82.22	82.94
CDY70536	Canola	nucleus	81.92	81.92
KRH27485	Soybean	nucleus	48.69	53.02
KRH20828	Soybean	nucleus	47.81	52.73
KRG93751	Soybean	nucleus	48.69	49.7
GSMUA_Achr8P31350_001	Banana	nucleus	40.23	49.46
VIT_13s0064g00960.t01	Wine grape	nucleus	41.11	48.79
KRH18309	Soybean	nucleus	47.81	48.09
GSMUA_AchrUn_...	Banana	nucleus	39.07	47.35
AT5G12870.1	Thale cress	nucleus	37.9	46.43
GSMUA_Achr2P07780_001	Banana	nucleus	39.94	46.13
PGSC0003DMT400018995	Potato	nucleus	46.36	45.3
Solyc11g065840.1.1	Tomato	nucleus	46.36	45.04
AT1G57560.1	Thale cress	nucleus	27.99	30.57
AT5G52260.1	Thale cress	nucleus	23.32	29.85
AT3G48920.1	Thale cress	nucleus	21.87	28.74
AT4G25560.1	Thale cress	nucleus	22.74	27.56
AT5G26660.1	Thale cress	nucleus	28.28	27.56
AT3G12720.1	Thale cress	nucleus	24.49	27.36
AT1G09540.1	Thale cress	nucleus	28.28	26.5
AT3G13890.1	Thale cress	nucleus	28.28	26.43
AT4G01680.2	Thale cress	nucleus	26.24	25.86
AT1G63910.1	Thale cress	nucleus	25.95	24.05

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:819997	UniProt:A0A178V8Z2	ProteinID:AAG50833.1	EMBL:AB493606
ProteinID:AEE74637.1	EMBL:AF371974	EMBL:AK176048	ArrayExpress:AT3G08500	EnsemblPlantsGene:AT3G08500	RefSeq:AT3G08500
TAIR:AT3G08500	RefSeq:AT3G08500-TAIR-G	EnsemblPlants:AT3G08500.1	TAIR:AT3G08500.1	EMBL:AY550293	EMBL:BT026506
EMBL:DQ446645	EMBL:DQ653071	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
GO:GO:0045893	GO:GO:2000652	InterPro:Homeobox-like_sf	InterPro:IPR017930	Symbol:MYB83	InterPro:Myb_dom
RefSeq:NP_187463.1	ProteinID:OAP02264.1	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF888
UniProt:Q9C6U1	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00000A5D02	EMBL:Z95806
SEG:seg	:	:	:	:	:

Description

MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]

Coordinates

chr3:-:2576444..2578276

Molecular Weight (calculated)

38421.0 Da

IEP (calculated)

6.097

GRAVY (calculated)

-0.698

Length

343 amino acids

Sequence
(BLAST)

001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.