Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93751 | Soybean | nucleus | 90.03 | 91.37 |
| Zm00001d023931_P001 | Maize | nucleus | 21.11 | 74.23 |
| KRH27485 | Soybean | nucleus | 68.04 | 73.65 |
| KRH20828 | Soybean | nucleus | 65.69 | 72.03 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 44.57 | 52.6 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 41.06 | 50.18 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 43.11 | 49.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.76 | 49.12 |
| Bra029696.1-P | Field mustard | nucleus | 47.51 | 48.65 |
| CDY35982 | Canola | nucleus | 47.51 | 48.36 |
| AT3G08500.1 | Thale cress | nucleus | 48.09 | 47.81 |
| CDY27999 | Canola | nucleus | 46.92 | 47.76 |
| KRH24713 | Soybean | nucleus | 46.92 | 47.62 |
| Bra001284.1-P | Field mustard | nucleus | 46.63 | 46.76 |
| CDX74013 | Canola | nucleus | 46.63 | 46.76 |
| CDY70536 | Canola | nucleus | 46.92 | 46.65 |
| KRH29717 | Soybean | nucleus | 46.33 | 46.47 |
| Solyc11g065840.1.1 | Tomato | nucleus | 48.09 | 46.46 |
| PGSC0003DMT400018995 | Potato | nucleus | 47.51 | 46.15 |
| KRH23131 | Soybean | nucleus | 43.99 | 45.32 |
| KRH10204 | Soybean | nucleus | 44.28 | 45.21 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 43.99 | 38.56 |
| TraesCS5D01G113300.1 | Wheat | nucleus | 43.4 | 38.05 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 43.11 | 37.69 |
| EES17106 | Sorghum | nucleus | 42.23 | 34.45 |
| KRH35334 | Soybean | nucleus | 24.93 | 31.48 |
| HORVU5Hr1G027750.1 | Barley | nucleus | 42.82 | 31.47 |
| KRH09018 | Soybean | nucleus | 25.81 | 30.24 |
| KRH41236 | Soybean | nucleus | 28.45 | 30.22 |
| KRH27893 | Soybean | nucleus | 28.15 | 29.54 |
| KRH63612 | Soybean | nucleus | 31.09 | 29.53 |
| KRH59965 | Soybean | nucleus | 27.57 | 29.38 |
| KRH38485 | Soybean | nucleus | 24.93 | 29.21 |
| KRH57123 | Soybean | nucleus | 31.67 | 29.19 |
| KRH77586 | Soybean | nucleus | 27.86 | 29.14 |
| KRH44125 | Soybean | nucleus | 29.33 | 28.65 |
| KRH10036 | Soybean | nucleus | 29.62 | 28.61 |
| KRH54334 | Soybean | nucleus | 30.5 | 28.57 |
| KRH47101 | Soybean | nucleus | 29.03 | 28.12 |
| KRH03235 | Soybean | nucleus | 29.33 | 27.62 |
| KRH68389 | Soybean | nucleus | 32.55 | 26.55 |
| KRH13791 | Soybean | nucleus | 25.22 | 26.46 |
| KRH68350 | Soybean | nucleus | 32.26 | 26.32 |
| KRH43663 | Soybean | nucleus | 25.22 | 26.3 |
| KRG96660 | Soybean | nucleus | 33.43 | 26.27 |
| KRG91494 | Soybean | nucleus | 24.93 | 25.53 |
| KRG90431 | Soybean | nucleus | 31.67 | 25.23 |
| KRH33726 | Soybean | nucleus | 31.67 | 25.17 |
| KRH69136 | Soybean | nucleus | 31.38 | 24.65 |
| KRH33667 | Soybean | nucleus | 32.84 | 24.56 |
| KRG96619 | Soybean | plastid, vacuole | 32.26 | 22.22 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100813660 | MapMan:15.5.2.1 | EMBL:ACUP02008056 | EnsemblPlantsGene:GLYMA_13G050400 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7LXQ7 | EnsemblPlants:KRH18309 | ProteinID:KRH18309 |
| ProteinID:KRH18309.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF915 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00023D1825 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:-:14652395..14656183
Molecular Weight (calculated)
38949.8 Da
IEP (calculated)
6.402
GRAVY (calculated)
-0.717
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKPYMMEKD KMNNNIKSKL RKGLWSPEED EKLLRYMITK GQGCWSDIAR NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEELIIHLH SILGNRWSQI
101: AARLPGRTDN EIKNFWNSTL KKRLKMNNNI NATSSPNNSY SSSEPRDVNV MGGIMPMNEH DLMTMCMDSS SSTSSSCMQS MHTTNMVLTD QFDPFPLLSN
201: NRYDMTGATD FLDNMAACLT QVGMVDHDHG VVHDGYGTLE PNKTGLESDF SLPPLESRSI DDNSSTPIDH VKSHNNNNHF KNSCFNNTDH HHHIQCSNNV
301: VVEDLFGFGN HGHGESFRME EWDFEGLIQD IPYFSSLDFQ V
101: AARLPGRTDN EIKNFWNSTL KKRLKMNNNI NATSSPNNSY SSSEPRDVNV MGGIMPMNEH DLMTMCMDSS SSTSSSCMQS MHTTNMVLTD QFDPFPLLSN
201: NRYDMTGATD FLDNMAACLT QVGMVDHDHG VVHDGYGTLE PNKTGLESDF SLPPLESRSI DDNSSTPIDH VKSHNNNNHF KNSCFNNTDH HHHIQCSNNV
301: VVEDLFGFGN HGHGESFRME EWDFEGLIQD IPYFSSLDFQ V
001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
Arabidopsis Description
MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.