Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008206_P001 | Maize | nucleus | 47.42 | 63.01 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 77.32 | 26.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 76.29 | 26.15 |
| Bra006166.1-P | Field mustard | nucleus | 72.16 | 25.0 |
| CDX78493 | Canola | nucleus | 72.16 | 25.0 |
| CDX91158 | Canola | nucleus | 70.1 | 24.46 |
| CDX85684 | Canola | nucleus | 70.1 | 24.37 |
| AT5G12870.1 | Thale cress | nucleus | 70.1 | 24.29 |
| CDY53970 | Canola | nucleus | 68.04 | 23.57 |
| Bra008875.1-P | Field mustard | nucleus | 68.04 | 23.57 |
| KRH20828 | Soybean | nucleus | 75.26 | 23.47 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 71.13 | 23.23 |
| KRH27485 | Soybean | nucleus | 75.26 | 23.17 |
| Zm00001d043729_P001 | Maize | nucleus | 54.64 | 23.14 |
| Zm00001d039700_P001 | Maize | nucleus | 56.7 | 23.01 |
| TraesCS5D01G113300.1 | Wheat | nucleus | 91.75 | 22.88 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 91.75 | 22.88 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 91.75 | 22.82 |
| EES17106 | Sorghum | nucleus | 97.94 | 22.73 |
| VIT_06s0004g02110.t01 | Wine grape | nucleus | 75.26 | 22.46 |
| Zm00001d024784_P001 | Maize | nucleus | 58.76 | 22.27 |
| Zm00001d011669_P001 | Maize | nucleus | 54.64 | 22.08 |
| KRH23131 | Soybean | nucleus | 74.23 | 21.75 |
| Zm00001d009435_P001 | Maize | nucleus | 56.7 | 21.74 |
| KRH24713 | Soybean | nucleus | 75.26 | 21.73 |
| KRH10204 | Soybean | nucleus | 74.23 | 21.56 |
| KRH29717 | Soybean | nucleus | 74.23 | 21.18 |
| KRG93751 | Soybean | nucleus | 73.2 | 21.13 |
| KRH18309 | Soybean | nucleus | 74.23 | 21.11 |
| PGSC0003DMT400018995 | Potato | nucleus | 76.29 | 21.08 |
| Solyc01g087130.2.1 | Tomato | nucleus | 76.29 | 21.02 |
| Zm00001d040527_P001 | Maize | nucleus | 60.82 | 21.0 |
| Solyc11g065840.1.1 | Tomato | nucleus | 76.29 | 20.96 |
| PGSC0003DMT400017709 | Potato | nucleus | 75.26 | 20.56 |
| Zm00001d051267_P001 | Maize | nucleus | 55.67 | 19.42 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 56.7 | 19.03 |
| Zm00001d038878_P001 | Maize | nucleus | 62.89 | 18.94 |
| CDX97209 | Canola | nucleus | 69.07 | 18.93 |
| HORVU5Hr1G027750.1 | Barley | nucleus | 89.69 | 18.75 |
| Zm00001d017383_P001 | Maize | nucleus | 55.67 | 18.56 |
| Zm00001d008695_P001 | Maize | nucleus | 51.55 | 18.05 |
| Zm00001d021537_P001 | Maize | nucleus | 55.67 | 17.82 |
| Zm00001d014989_P001 | Maize | nucleus | 54.64 | 17.21 |
| Zm00001d022259_P002 | Maize | nucleus | 55.67 | 15.47 |
| Zm00001d005055_P001 | Maize | nucleus | 35.05 | 14.98 |
| Zm00001d024630_P002 | Maize | nucleus | 55.67 | 14.92 |
| Zm00001d010907_P001 | Maize | nucleus | 59.79 | 13.62 |
| Bra023380.1-P | Field mustard | nucleus | 10.31 | 4.81 |
Protein Annotations
| EnsemblPlants:Zm00001d023931_P001 | EnsemblPlants:Zm00001d023931_T001 | EnsemblPlantsGene:Zm00001d023931 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF915 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:AQK40408.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00084517CC | UniProt:A0A1D6IWW0 | MapMan:15.5.2.1 | : |
Description
MYB-transcription factor 109Putative MYB DNA-binding domain superfamily protein%3B Secondary wall MYB46 transcription factor
Coordinates
chr10:+:29359954..29360247
Molecular Weight (calculated)
10782.9 Da
IEP (calculated)
10.172
GRAVY (calculated)
-0.570
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MRKPECPAAN SSNAGAAAAK LRKGLWSPEE DERLVAYMLR SGQGSWSDVA RNAGLQRCGK SCRLRWINYL RPDLKRGAFS PQEEELIVSL HAILGNR
001: MRKPEVAIAA STHQVKKMKK GLWSPEEDSK LMQYMLSNGQ GCWSDVAKNA GLQRCGKSCR LRWINYLRPD LKRGAFSPQE EDLIIRFHSI LGNRWSQIAA
101: RLPGRTDNEI KNFWNSTIKK RLKKMSDTSN LINNSSSSPN TASDSSSNSA SSLDIKDIIG SFMSLQEQGF VNPSLTHIQT NNPFPTGNMI SHPCNDDFTP
201: YVDGIYGVNA GVQGELYFPP LECEEGDWYN ANINNHLDEL NTNGSGNAPE GMRPVEEFWD LDQLMNTEVP SFYFNFKQSI
101: RLPGRTDNEI KNFWNSTIKK RLKKMSDTSN LINNSSSSPN TASDSSSNSA SSLDIKDIIG SFMSLQEQGF VNPSLTHIQT NNPFPTGNMI SHPCNDDFTP
201: YVDGIYGVNA GVQGELYFPP LECEEGDWYN ANINNHLDEL NTNGSGNAPE GMRPVEEFWD LDQLMNTEVP SFYFNFKQSI
Arabidopsis Description
MYB46Transcription factor MYB46 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.