Factsheet for Zm00001d011669_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043729_P001	Maize	nucleus	77.5	81.22
EES03490	Sorghum	nucleus	85.0	64.97
Zm00001d008206_P001	Maize	nucleus	18.75	61.64
Os01t0702700-01	Rice	nucleus	74.17	59.14
Zm00001d023931_P001	Maize	nucleus	22.08	54.64
Zm00001d009435_P001	Maize	nucleus	52.92	50.2
Zm00001d038878_P001	Maize	nucleus	61.25	45.65
Zm00001d024784_P001	Maize	nucleus	30.0	28.12
Zm00001d039700_P001	Maize	nucleus	25.83	25.94
Zm00001d040527_P001	Maize	nucleus	29.58	25.27
VIT_17s0000g09080.t01	Wine grape	nucleus	37.08	24.52
PGSC0003DMT400046645	Potato	nucleus	32.92	24.31
Solyc03g112390.2.1	Tomato	nucleus	32.92	24.31
Solyc06g071690.2.1	Tomato	nucleus	32.5	24.3
PGSC0003DMT400069644	Potato	nucleus	31.25	23.81
KRH57123	Soybean	nucleus	36.25	23.51
KRH03235	Soybean	nucleus	35.0	23.2
KRH63612	Soybean	nucleus	34.58	23.12
GSMUA_AchrUn_...	Banana	plasma membrane	29.58	22.9
Zm00001d022259_P002	Maize	nucleus	32.92	22.64
KRH54334	Soybean	nucleus	34.17	22.53
Zm00001d051267_P001	Maize	nucleus	23.75	20.5
Zm00001d017383_P001	Maize	nucleus	24.58	20.27
Zm00001d021537_P001	Maize	nucleus	25.0	19.8
Zm00001d010907_P001	Maize	nucleus	35.0	19.72
HORVU1Hr1G079030.2	Barley	nucleus	38.75	19.62
Zm00001d014989_P001	Maize	nucleus	25.0	19.48
Zm00001d008695_P001	Maize	nucleus	22.08	19.13
Zm00001d005055_P001	Maize	nucleus	17.5	18.5
Zm00001d024630_P002	Maize	nucleus	25.42	16.85

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	UniProt:A0A1D6G2X0	ProteinID:AQK97710.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:IPR017930	InterPro:Myb-like_dom
InterPro:Myb_dom	PFAM:PF13921	PFscan:PS50090	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF597
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000842BA46	EnsemblPlantsGene:Zm00001d011669	EnsemblPlants:Zm00001d011669_P001
EnsemblPlants:Zm00001d011669_T001	SEG:seg	:	:	:	:

Description

MYB-transcription factor 124Putative MYB DNA-binding domain superfamily protein

Coordinates

chr8:-:158166587..158167961

Molecular Weight (calculated)

26245.3 Da

IEP (calculated)

5.531

GRAVY (calculated)

-0.588

Length

240 amino acids

Sequence
(BLAST)

001: MGRHAASGGG VQQKLRKGLW SPEEDEKLYN HIIRYGRCGK SCRLRWINYL RPDLKRGSFS QQEEDAIVGL HQILGNRYVQ CVPDQPTDLL TQRTAADGGS
101: DMKHQQVFDP FPLTDSFGGG FGAALYGHTG GKQDAAAFVD YSSVLDVSEN LGYGGESSSN SSNWNCAPEV HNNALDGDAP LHWASESKAT PFAGYGGEEQ
201: SLLGHRFSVP CHGQQEQSPP RFDFDIGRGA VVGEFSLEFF

Best Arabidopsis Sequence Match ( AT4G01680.3 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLRYIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEENLIIE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRLRG IDPVTHKLLT EIETGTDDKT KPVEKSQQTY LVETDGSSST TTCSTNQNNN TDHLYTGNFG FQRLSLENGS RIAAGSDLGI
201: WIPQTGRNHH HHVDETIPSA VSISKFKRVT TTIQHSLEMG I

Arabidopsis Description

MYB55Myb domain protein 55 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.