Factsheet for Solyc06g071690.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069644	Potato	nucleus	91.9	93.65
Solyc01g009650.1.1	Tomato	nucleus	17.13	60.44
Solyc03g112390.2.1	Tomato	nucleus	59.19	58.46
VIT_17s0000g09080.t01	Wine grape	nucleus	59.19	52.34
KRH63612	Soybean	nucleus	52.02	46.52
KRH54334	Soybean	nucleus	52.02	45.88
KRH57123	Soybean	nucleus	52.34	45.41
KRH03235	Soybean	nucleus	50.47	44.75
TraesCS3B01G286500.1	Wheat	nucleus	37.38	42.7
TraesCS3D01G255400.1	Wheat	nucleus	37.69	42.46
TraesCS1D01G371800.1	Wheat	nucleus	37.69	41.72
TraesCS1B01G383700.1	Wheat	nucleus	38.01	41.64
TraesCS1D01G371700.1	Wheat	nucleus	38.01	41.64
TraesCS1D01G371900.1	Wheat	nucleus	36.45	41.64
TraesCS1A01G366100.1	Wheat	nucleus	37.69	41.44
TraesCS1A01G365900.1	Wheat	nucleus	37.69	40.74
Zm00001d009435_P001	Maize	nucleus	32.09	40.71
TraesCS1B01G383800.1	Wheat	nucleus	36.45	40.62
TraesCS1A01G366200.1	Wheat	nucleus	37.38	40.54
Os01t0702700-01	Rice	nucleus	38.01	40.53
TraesCS1D01G371500.1	Wheat	nucleus	37.38	40.27
TraesCS1B01G383600.1	Wheat	nucleus	38.01	40.0
TraesCS1B01G383900.1	Wheat	nucleus	35.83	39.79
TraesCS1A01G366300.1	Wheat	nucleus	35.83	39.79
TraesCS1D01G371400.1	Wheat	nucleus	37.38	39.6
GSMUA_Achr3P28540_001	Banana	nucleus	37.38	39.09
EES18602	Sorghum	nucleus	38.63	38.51
EES03490	Sorghum	nucleus	37.38	38.22
Zm00001d038878_P001	Maize	nucleus	38.32	38.2
Os05t0543600-01	Rice	nucleus	37.07	38.14
TraesCS3A01G254500.1	Wheat	nucleus	37.38	37.97
TraesCS1A01G366000.1	Wheat	nucleus	33.02	37.86
GSMUA_Achr9P22190_001	Banana	nucleus	37.07	37.78
TraesCS3A01G200300.1	Wheat	nucleus	35.51	37.75
GSMUA_Achr4P06410_001	Banana	nucleus	35.83	37.58
TraesCS3B01G224500.1	Wheat	nucleus	35.2	36.45
HORVU3Hr1G047290.2	Barley	nucleus	33.96	35.97
EES03100	Sorghum	nucleus	38.01	35.78
GSMUA_Achr4P13280_001	Banana	nucleus	33.33	35.08
Zm00001d043729_P001	Maize	nucleus	23.68	33.19
EES02393	Sorghum	nucleus	28.66	32.86
Zm00001d011669_P001	Maize	nucleus	24.3	32.5
EES07893	Sorghum	nucleus	24.92	31.62
HORVU1Hr1G079040.4	Barley	nucleus, plastid	34.58	31.53
Solyc01g102340.2.1	Tomato	nucleus	41.43	31.22
Solyc02g082040.2.1	Tomato	nucleus	31.46	31.17
GSMUA_AchrUn_...	Banana	plasma membrane	29.59	30.65
Zm00001d005055_P001	Maize	nucleus	21.5	30.4
Zm00001d039700_P001	Maize	nucleus	22.43	30.13
Solyc10g044680.1.1	Tomato	nucleus	37.07	29.9
Solyc03g025870.2.1	Tomato	nucleus	25.55	29.39
OQU86237	Sorghum	nucleus	24.61	29.37
Solyc10g005240.2.1	Tomato	nucleus	31.15	28.99
TraesCS3D01G094500.1	Wheat	nucleus	25.55	28.77
Solyc03g121740.1.1	Tomato	nucleus	32.71	28.77
TraesCS3A01G094300.1	Wheat	nucleus	24.61	28.42
TraesCS3B01G109800.1	Wheat	nucleus	24.92	28.17
HORVU3Hr1G016940.1	Barley	nucleus	24.92	27.97
Solyc08g081500.1.1	Tomato	nucleus	28.66	27.79
Zm00001d008695_P001	Maize	nucleus	23.68	27.44
Solyc01g087130.2.1	Tomato	nucleus	29.59	26.99
Solyc11g065840.1.1	Tomato	nucleus	28.04	25.5
HORVU1Hr1G079030.2	Barley	nucleus	24.92	16.88

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K4C8P1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF466
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc06g071690.2	EnsemblPlants:Solyc06g071690.2.1	UniParc:UPI00027672CD
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:44160861..44162462

Molecular Weight (calculated)

37052.6 Da

IEP (calculated)

7.680

GRAVY (calculated)

-0.754

Length

321 amino acids

Sequence
(BLAST)

001: MGRHSVFVKE KTRKGLWSPE EDEKLYNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGMF SQEEEDMIIT LHKVLGNRWA QIAAKLPGRT
101: DNEIKNFWNS NLKRKLIKQG IDPNTHKPLS ENHQVRNEPN CTDKTSSLLM PKLPNMSDSA EIQQPFHFFN SKRNFNSQAV TRELTEVSKN QLVSKQVFDP
201: LFLYEFQASV NPIGPYAHHH NQIEGNQDFG FCSNFQHVHM TTESDISDSS TSRMSTSNSS NTMISHYNSV GIQMNEMLEW DADNKIDSLI QYPYVGIKNE
301: ENYSNNNNTL SGENLDVFHH I

Best Arabidopsis Sequence Match ( AT5G26660.1 )
(BLAST)

001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL

Arabidopsis Description

MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.