Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400087467 | Potato | nucleus | 71.23 | 94.55 |
Solyc01g009650.1.1 | Tomato | nucleus | 15.07 | 60.44 |
VIT_09s0002g01670.t01 | Wine grape | nucleus | 41.64 | 49.19 |
GSMUA_Achr6P35800_001 | Banana | nucleus | 37.81 | 46.15 |
KRH44125 | Soybean | nucleus | 44.11 | 46.13 |
KRH47101 | Soybean | nucleus | 44.38 | 46.02 |
KRH10036 | Soybean | nucleus | 44.38 | 45.89 |
CDX97526 | Canola | nucleus | 39.18 | 42.18 |
CDY37496 | Canola | nucleus | 41.1 | 42.02 |
Bra021515.1-P | Field mustard | nucleus | 40.82 | 41.85 |
CDY39077 | Canola | nucleus | 40.82 | 41.74 |
Bra027389.1-P | Field mustard | nucleus | 39.18 | 41.09 |
AT3G13890.1 | Thale cress | nucleus | 40.0 | 39.78 |
CDY55231 | Canola | nucleus | 35.34 | 39.33 |
Solyc02g082040.2.1 | Tomato | nucleus | 33.15 | 37.35 |
HORVU3Hr1G066860.11 | Barley | nucleus | 29.04 | 36.05 |
TraesCS3A01G251200.1 | Wheat | nucleus | 28.77 | 35.84 |
TraesCS3D01G251600.1 | Wheat | nucleus | 28.77 | 35.84 |
Os01t0709000-01 | Rice | nucleus | 29.86 | 35.5 |
EES03504 | Sorghum | nucleus | 30.14 | 34.48 |
Solyc03g112390.2.1 | Tomato | nucleus | 29.86 | 33.54 |
TraesCS3B01G280700.1 | Wheat | nucleus | 26.03 | 33.22 |
Solyc06g071690.2.1 | Tomato | nucleus | 28.77 | 32.71 |
Solyc10g005240.2.1 | Tomato | nucleus | 30.68 | 32.46 |
Solyc08g081500.1.1 | Tomato | nucleus | 28.49 | 31.42 |
Solyc03g025870.2.1 | Tomato | nucleus | 21.92 | 28.67 |
Solyc11g065840.1.1 | Tomato | nucleus | 27.12 | 28.05 |
Solyc01g102340.2.1 | Tomato | nucleus | 31.51 | 27.0 |
Solyc10g044680.1.1 | Tomato | nucleus | 29.04 | 26.63 |
Solyc01g087130.2.1 | Tomato | nucleus | 24.66 | 25.57 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009834 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K4BMX3 | InterPro:Myb_dom | PFAM:PF00249 |
PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF656 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
EnsemblPlantsGene:Solyc03g121740.1 | EnsemblPlants:Solyc03g121740.1.1 | UniParc:UPI00027655B0 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3:-:69811506..69813290
Molecular Weight (calculated)
41178.8 Da
IEP (calculated)
7.635
GRAVY (calculated)
-0.477
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHTCCNKQ KVKRGLWSPE EDEKLINYIT TYGHACWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGSF SPQEAALIIE LHGILGNRWA QIAKHLPGRT
101: DNEVKNFWNS SIKKKLHLSH GILPDNSIII PTYNNLITNP IPNPSFDNFY SFNPNVPSTN SFMSSISSPL ILDQMNNINH NGDLNLTNHV IMPNSLPNLS
201: FDSISNDPTW FNFNYPNHLQ HDLEYNPSVI KQDNSINSMV TSNISLNCTN GENFMDSTNA AIKNHQDLMM TLPKLSEMIK ENEDGILEST PIVSQHSDTM
301: VVKSALPCTS YIMNPHNNLH RVVNKVELMK SLHMSSSSSS SSSTSSSWSA LSCNQFMMNP RTWDS
101: DNEVKNFWNS SIKKKLHLSH GILPDNSIII PTYNNLITNP IPNPSFDNFY SFNPNVPSTN SFMSSISSPL ILDQMNNINH NGDLNLTNHV IMPNSLPNLS
201: FDSISNDPTW FNFNYPNHLQ HDLEYNPSVI KQDNSINSMV TSNISLNCTN GENFMDSTNA AIKNHQDLMM TLPKLSEMIK ENEDGILEST PIVSQHSDTM
301: VVKSALPCTS YIMNPHNNLH RVVNKVELMK SLHMSSSSSS SSSTSSSWSA LSCNQFMMNP RTWDS
001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGLQRCG KSCRLRWINY LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT
101: DNEVKNFWNS SIKKKLMSHH HHGHHHHHLS SMASLLTNLP YHNGFNPTTV DDESSRFMSN IITNTNPNFI TPSHLSLPSP HVMTPLMFPT SREGDFKFLT
201: TNNPNQSHHH DNNHYNNLDI LSPTPTINNH HQPSLSSCPH DNNLQWPALP DFPASTISGF QETLQDYDDA NKLNVFVTPF NDNAKKLLCG EVLEGKVLSS
301: SSPISQDHGL FLPTTYNFQM TSTSDHQHHH RVDSYINHMI IPSSSSSSPI SCGQYVIT
101: DNEVKNFWNS SIKKKLMSHH HHGHHHHHLS SMASLLTNLP YHNGFNPTTV DDESSRFMSN IITNTNPNFI TPSHLSLPSP HVMTPLMFPT SREGDFKFLT
201: TNNPNQSHHH DNNHYNNLDI LSPTPTINNH HQPSLSSCPH DNNLQWPALP DFPASTISGF QETLQDYDDA NKLNVFVTPF NDNAKKLLCG EVLEGKVLSS
301: SSPISQDHGL FLPTTYNFQM TSTSDHQHHH RVDSYINHMI IPSSSSSSPI SCGQYVIT
Arabidopsis Description
MYB26Transcription factor MYB26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.