Factsheet for Os01t0709000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G066860.11	Barley	nucleus	77.52	80.95
TraesCS3A01G251200.1	Wheat	nucleus	76.87	80.55
TraesCS3D01G251600.1	Wheat	nucleus	75.9	79.52
TraesCS3B01G280700.1	Wheat	nucleus	71.99	77.27
EES03504	Sorghum	nucleus	75.24	72.41
PGSC0003DMT400087467	Potato	nucleus	34.85	38.91
GSMUA_Achr6P35800_001	Banana	nucleus	37.46	38.46
VIT_09s0002g01670.t01	Wine grape	nucleus	36.16	35.92
KRH44125	Soybean	nucleus	37.46	32.95
Os01t0702700-01	Rice	nucleus	31.92	32.56
KRH47101	Soybean	nucleus	36.81	32.1
Os05t0543600-01	Rice	nucleus	32.57	32.05
KRH10036	Soybean	nucleus	36.81	32.01
CDY55231	Canola	nucleus	33.88	31.71
Os04t0532800-01	Rice	nucleus	27.69	31.14
Bra021515.1-P	Field mustard	nucleus	35.83	30.9
CDY39077	Canola	nucleus	35.83	30.81
CDY37496	Canola	nucleus	35.83	30.81
CDX97526	Canola	nucleus	33.22	30.09
Solyc03g121740.1.1	Tomato	nucleus	35.5	29.86
AT3G13890.1	Thale cress	nucleus	35.5	29.7
Os05t0140100-01	Rice	nucleus	41.04	29.51
Bra027389.1-P	Field mustard	nucleus	33.22	29.31
Os07t0497500-00	Rice	nucleus	37.46	28.75
Os08t0151300-01	Rice	nucleus	32.25	27.58
Os01t0285300-01	Rice	nucleus	37.78	27.1
Os03t0371800-00	Rice	nucleus	32.9	25.38
Os07t0634900-00	Rice	plastid	15.31	13.02
Os12t0515300-00	Rice	nucleus	11.4	11.18

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4327821	ProteinID:BAF05945.1	ProteinID:BAS73963.1	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os01g0709000	EnsemblPlants:Os01t0709000-01
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF656	UniProt:Q0JJY3	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000009CD34	RefSeq:XP_015645252.1	SEG:seg	:

Description

Similar to Transcription factor MYB1. (Os01t0709000-01)

Coordinates

chr1:+:29469565..29471507

Molecular Weight (calculated)

32779.7 Da

IEP (calculated)

7.993

GRAVY (calculated)

-0.226

Length

307 amino acids

Sequence
(BLAST)

001: MGHHSCCNKQ KVRRGLWSPE EDEKLVKYIS THGHGCWSSV PRLAGLQRCG KSCRLRWINY LRPDLKRGSF SQQEESLIIE LHRVLGNRWA QIAKHLPGRT
101: DNEVKNFWNS TIKKKLISQA VGSLHPSSAD LYYNILDGAG QSIAAASLNA VENAAHGVTQ SPPSSVYNSA AWASFSSHQP IFLPGHGVHG CGGGDLQYAA
201: AVDGEFIRLC RAAEAYQLEN GAAGIVGGQC KPSDHLLAPE GVVARSCLPA FVEQKGGGGG AFLADPAMGP VMDFMDAILG SSTTSAASAS SVDSFSANTA
301: MQPHWIP

Best Arabidopsis Sequence Match ( AT3G13890.2 )
(BLAST)

001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGLQRCG KSCRLRWINY LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT
101: DNEVKNFWNS SIKKKLMSHH HHGHHHHHLS SMASLLTNLP YHNGFNPTTV DDESSRFMSN IITNTNPNFI TPSHLSLPSP HVMTPLMFPT SREGDFKFLT
201: TNNPNQSHHH DNNHYNNLDI LSPTPTINNH HQPSLSSCPH DNNLQWPALP DFPASTISGF QETLQDYDDA NKLNVFVTPF NDNAKKLLCG EVLEGKVLSS
301: SSPISQDHGL FLPTTYNFQM TSTSDHQHHH RVDSYINHMI IPSSSSSSPI SCGQYVIT

Arabidopsis Description

MYB26Transcription factor MYB26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.