Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39077 | Canola | nucleus | 97.76 | 97.76 |
| Bra021515.1-P | Field mustard | nucleus | 97.48 | 97.75 |
| CDX97526 | Canola | nucleus | 78.15 | 82.3 |
| AT3G13890.1 | Thale cress | nucleus | 81.23 | 79.02 |
| CDY55231 | Canola | nucleus | 70.31 | 76.52 |
| CDY05516 | Canola | nucleus | 26.05 | 70.45 |
| CDY05331 | Canola | nucleus | 26.05 | 70.45 |
| PGSC0003DMT400087467 | Potato | nucleus | 37.82 | 49.09 |
| VIT_09s0002g01670.t01 | Wine grape | nucleus | 39.78 | 45.95 |
| KRH44125 | Soybean | nucleus | 44.54 | 45.56 |
| KRH47101 | Soybean | nucleus | 44.26 | 44.89 |
| KRH10036 | Soybean | nucleus | 43.98 | 44.48 |
| Solyc03g121740.1.1 | Tomato | nucleus | 42.02 | 41.1 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 33.89 | 40.47 |
| CDY43404 | Canola | nucleus | 30.53 | 37.07 |
| HORVU3Hr1G066860.11 | Barley | nucleus | 29.97 | 36.39 |
| TraesCS3D01G251600.1 | Wheat | nucleus | 29.69 | 36.18 |
| TraesCS3A01G251200.1 | Wheat | nucleus | 29.69 | 36.18 |
| CDY42172 | Canola | nucleus | 29.69 | 36.05 |
| CDY42171 | Canola | nucleus | 29.69 | 36.05 |
| CDY08409 | Canola | nucleus | 29.69 | 36.05 |
| Os01t0709000-01 | Rice | nucleus | 30.81 | 35.83 |
| CDX93504 | Canola | nucleus | 28.57 | 34.69 |
| CDY50901 | Canola | nucleus | 28.85 | 34.45 |
| EES03504 | Sorghum | nucleus | 30.25 | 33.86 |
| TraesCS3B01G280700.1 | Wheat | nucleus | 26.89 | 33.57 |
| CDY22635 | Canola | nucleus | 28.57 | 33.01 |
| CDY06359 | Canola | nucleus | 27.73 | 32.14 |
| CDX91158 | Canola | nucleus | 24.93 | 32.01 |
| CDX85684 | Canola | nucleus | 24.93 | 31.9 |
| CDY53970 | Canola | nucleus | 24.93 | 31.79 |
| CDY50197 | Canola | nucleus | 22.13 | 31.6 |
| CDY32188 | Canola | nucleus | 29.69 | 31.55 |
| CDY07124 | Canola | nucleus | 29.41 | 31.25 |
| CDY58217 | Canola | nucleus | 29.41 | 31.25 |
| CDX78493 | Canola | nucleus | 24.09 | 30.71 |
| CDY31082 | Canola | nucleus | 29.69 | 30.64 |
| CDY68301 | Canola | nucleus | 28.01 | 29.85 |
| CDX92718 | Canola | nucleus | 21.85 | 29.77 |
| CDX94440 | Canola | nucleus | 21.29 | 29.57 |
| CDY32589 | Canola | nucleus | 20.73 | 29.48 |
| CDY64708 | Canola | nucleus | 21.29 | 29.46 |
| CDX87038 | Canola | nucleus | 27.73 | 29.29 |
| CDY38211 | Canola | nucleus | 30.25 | 29.27 |
| CDY08343 | Canola | nucleus | 30.25 | 29.27 |
| CDX89413 | Canola | nucleus | 22.13 | 29.26 |
| CDY05881 | Canola | nucleus | 20.73 | 28.68 |
| CDY25547 | Canola | nucleus | 29.69 | 28.65 |
| CDX88230 | Canola | nucleus | 27.73 | 27.81 |
| CDX80576 | Canola | nucleus | 27.73 | 27.73 |
| CDY38910 | Canola | nucleus | 20.73 | 27.72 |
| CDY27999 | Canola | nucleus | 25.49 | 27.16 |
| CDY35982 | Canola | nucleus | 25.21 | 26.87 |
| CDX74013 | Canola | nucleus | 24.37 | 25.59 |
| CDX97209 | Canola | nucleus | 24.93 | 25.14 |
| CDY70536 | Canola | nucleus | 23.53 | 24.49 |
| CDY34386 | Canola | extracellular | 11.48 | 13.67 |
| CDY70602 | Canola | nucleus, plastid | 4.2 | 9.62 |
| CDY70493 | Canola | cytosol, plastid | 2.52 | 6.82 |
| CDY05517 | Canola | plastid | 0.84 | 1.75 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HID0 | UniProt:A0A078HID0 | EnsemblPlants:CDY37496 | ProteinID:CDY37496 |
| ProteinID:CDY37496.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00064108001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF901 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE468D | SEG:seg |
Description
BnaC01g37360DBnaC01g37360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HID0]
Coordinates
chrLK032401:-:321801..323073
Molecular Weight (calculated)
40523.7 Da
IEP (calculated)
7.620
GRAVY (calculated)
-0.602
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN TYGHGCWSSV PKHAGIYIGL QRCGKSCRLR WINYLRPDLK RGSFSPQEAA LIIELHSILG NRLWAQIAKH
101: LPGRTDNEVK NFWNSSIKKK LMSHHYHHHH GHHHHHTSSM ASLLTNLPYH NVFNGTVCDD EGSRFMSSII ANTNPNFITP NHLPLPSHVM TPLMFPTSRE
201: GDVKYLTTTN TNRSHQDNNL STNLDIFSAT PFINNHHHHH DNDPQWPSLP DLPASTISTF HDSLQDYDDG DKLNVFVTPH NDNGDPRNFP LVSTKLLCGQ
301: VLEGKAISQD HCLLLPTTYD LQMHGDYRRV DSYINHMIIP SSSSSSSPIS CGQYVIT
101: LPGRTDNEVK NFWNSSIKKK LMSHHYHHHH GHHHHHTSSM ASLLTNLPYH NVFNGTVCDD EGSRFMSSII ANTNPNFITP NHLPLPSHVM TPLMFPTSRE
201: GDVKYLTTTN TNRSHQDNNL STNLDIFSAT PFINNHHHHH DNDPQWPSLP DLPASTISTF HDSLQDYDDG DKLNVFVTPH NDNGDPRNFP LVSTKLLCGQ
301: VLEGKAISQD HCLLLPTTYD LQMHGDYRRV DSYINHMIIP SSSSSSSPIS CGQYVIT
001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGTYTHI HGFCLQRCGK SCRLRWINYL RPDLKRGSFS PQEAALIIEL HSILGNRWAQ
101: IAKHLPGRTD NEVKNFWNSS IKKKLMSHHH HGHHHHHLSS MASLLTNLPY HNGFNPTTVD DESSRFMSNI ITNTNPNFIT PSHLSLPSPH VMTPLMFPTS
201: REGDFKFLTT NNPNQSHHHD NNHYNNLDIL SPTPTINNHH QPSLSSCPHD NNLQWPALPD FPASTISGFQ ETLQDYDDAN KLNVFVTPFN DNAKKLLCGE
301: VLEGKVLSSS SPISQDHGLF LPTTYNFQMT STSDHQHHHR VDSYINHMII PSSSSSSPIS CGQYVIT
101: IAKHLPGRTD NEVKNFWNSS IKKKLMSHHH HGHHHHHLSS MASLLTNLPY HNGFNPTTVD DESSRFMSNI ITNTNPNFIT PSHLSLPSPH VMTPLMFPTS
201: REGDFKFLTT NNPNQSHHHD NNHYNNLDIL SPTPTINNHH QPSLSSCPHD NNLQWPALPD FPASTISGFQ ETLQDYDDAN KLNVFVTPFN DNAKKLLCGE
301: VLEGKVLSSS SPISQDHGLF LPTTYNFQMT STSDHQHHHR VDSYINHMII PSSSSSSPIS CGQYVIT
Arabidopsis Description
MYB26Transcription factor MYB26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.