Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93504 | Canola | nucleus | 94.31 | 95.92 |
| Zm00001d008206_P001 | Maize | nucleus | 22.07 | 90.41 |
| CDY05331 | Canola | nucleus | 37.12 | 84.09 |
| CDY05516 | Canola | nucleus | 36.79 | 83.33 |
| CDY32188 | Canola | nucleus | 85.28 | 75.89 |
| CDY31082 | Canola | nucleus | 87.63 | 75.72 |
| CDY22635 | Canola | nucleus | 55.18 | 53.4 |
| CDY06359 | Canola | nucleus | 54.85 | 53.25 |
| GSMUA_Achr11P... | Banana | nucleus | 39.46 | 50.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.14 | 46.91 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 41.47 | 43.82 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 41.14 | 40.07 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 45.48 | 39.65 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 48.16 | 38.92 |
| CDY68301 | Canola | nucleus | 43.14 | 38.51 |
| KRH33726 | Soybean | nucleus | 55.18 | 38.46 |
| CDX87038 | Canola | nucleus | 43.48 | 38.46 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 44.15 | 38.37 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 42.81 | 38.32 |
| KRG90431 | Soybean | nucleus | 54.85 | 38.32 |
| Zm00001d024784_P001 | Maize | nucleus | 32.44 | 37.89 |
| CDY07124 | Canola | nucleus | 42.47 | 37.8 |
| CDY58217 | Canola | nucleus | 42.47 | 37.8 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 45.48 | 37.78 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 45.82 | 37.53 |
| Zm00001d040527_P001 | Maize | nucleus | 35.12 | 37.37 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 46.82 | 37.33 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 44.82 | 37.22 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 47.16 | 37.01 |
| Os05t0140100-01 | Rice | nucleus | 52.84 | 37.0 |
| Zm00001d010907_P001 | Maize | nucleus | 52.17 | 36.62 |
| Os01t0285300-01 | Rice | nucleus | 52.17 | 36.45 |
| EES02806 | Sorghum | nucleus | 51.84 | 36.3 |
| OQU77376 | Sorghum | nucleus | 52.17 | 36.28 |
| CDX88230 | Canola | nucleus | 43.14 | 36.24 |
| CDX80576 | Canola | nucleus | 43.14 | 36.13 |
| GSMUA_Achr11P... | Banana | nucleus | 45.15 | 36.0 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 51.51 | 35.9 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 51.51 | 35.9 |
| KRH68389 | Soybean | nucleus | 50.17 | 35.89 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 51.51 | 35.81 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 52.51 | 35.76 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 51.51 | 35.73 |
| KRG96660 | Soybean | nucleus | 51.84 | 35.71 |
| Solyc10g044680.1.1 | Tomato | nucleus | 46.49 | 34.92 |
| PGSC0003DMT400040774 | Potato | nucleus | 47.49 | 34.89 |
| PGSC0003DMT400047076 | Potato | nucleus | 49.5 | 34.74 |
| Solyc01g102340.2.1 | Tomato | nucleus | 48.83 | 34.27 |
| CDX78493 | Canola | nucleus | 31.77 | 33.93 |
| CDY53970 | Canola | nucleus | 31.77 | 33.93 |
| CDX85684 | Canola | nucleus | 31.1 | 33.33 |
| CDX91158 | Canola | nucleus | 30.77 | 33.09 |
| CDY43404 | Canola | nucleus | 32.44 | 32.99 |
| CDY08409 | Canola | nucleus | 31.77 | 32.31 |
| CDY42172 | Canola | nucleus | 31.77 | 32.31 |
| CDY42171 | Canola | nucleus | 31.77 | 32.31 |
| CDY32589 | Canola | nucleus | 26.76 | 31.87 |
| CDY50197 | Canola | nucleus | 25.75 | 30.8 |
| CDX94440 | Canola | nucleus | 26.42 | 30.74 |
| CDY38910 | Canola | nucleus | 27.09 | 30.34 |
| CDX89413 | Canola | nucleus | 27.09 | 30.0 |
| CDY05881 | Canola | nucleus | 25.75 | 29.84 |
| CDY64708 | Canola | nucleus | 25.75 | 29.84 |
| CDX92718 | Canola | nucleus | 25.42 | 29.01 |
| CDY37496 | Canola | nucleus | 34.45 | 28.85 |
| CDY39077 | Canola | nucleus | 34.45 | 28.85 |
| CDY27999 | Canola | nucleus | 32.11 | 28.66 |
| CDY35982 | Canola | nucleus | 31.77 | 28.36 |
| CDY55231 | Canola | nucleus | 31.1 | 28.35 |
| CDY38211 | Canola | nucleus | 34.11 | 27.64 |
| CDY08343 | Canola | nucleus | 34.11 | 27.64 |
| CDX97526 | Canola | nucleus | 31.1 | 27.43 |
| CDX74013 | Canola | nucleus | 31.1 | 27.35 |
| CDY70536 | Canola | nucleus | 31.1 | 27.11 |
| CDY25547 | Canola | nucleus | 32.78 | 26.49 |
| CDX97209 | Canola | nucleus | 30.77 | 25.99 |
| CDY34386 | Canola | extracellular | 13.04 | 13.0 |
| CDY05517 | Canola | plastid | 4.68 | 8.19 |
| CDY70602 | Canola | nucleus, plastid | 2.34 | 4.49 |
| CDY70493 | Canola | cytosol, plastid | 1.0 | 2.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078ILM5 | UniProt:A0A078ILM5 | EnsemblPlants:CDY50901 | ProteinID:CDY50901 |
| ProteinID:CDY50901.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00097742001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF910 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDEBCC | SEG:seg |
Description
BnaCnng19930DBnaCnng19930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILM5]
Coordinates
chrLK032946:-:89030..90683
Molecular Weight (calculated)
33505.1 Da
IEP (calculated)
8.065
GRAVY (calculated)
-0.688
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLNHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE IHSVLGNRWS QIAARLPGRT
101: DNEIKNLWNS SIKKKLRQRG IDPNTHKPIS EVDKDKTTAT SNNNNHKSPP SSSSPTNQDF FLERPSDFSD YFGLQKLNFN SNLGLSVTAD SSPLCSMIPS
201: QFSTGNMVGS VFQTPVCVKP SVTLAPDNTS NFFDNGGFSW STLNSQPIYI KSEAEYLADV SNITDPWSQS QNENLNTPED SDVFSKDLQR MAVSFGQSL
101: DNEIKNLWNS SIKKKLRQRG IDPNTHKPIS EVDKDKTTAT SNNNNHKSPP SSSSPTNQDF FLERPSDFSD YFGLQKLNFN SNLGLSVTAD SSPLCSMIPS
201: QFSTGNMVGS VFQTPVCVKP SVTLAPDNTS NFFDNGGFSW STLNSQPIYI KSEAEYLADV SNITDPWSQS QNENLNTPED SDVFSKDLQR MAVSFGQSL
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.