Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06359 | Canola | nucleus | 94.17 | 94.48 |
| Zm00001d008206_P001 | Maize | nucleus | 20.39 | 86.3 |
| CDY05516 | Canola | nucleus | 35.92 | 84.09 |
| CDY05331 | Canola | nucleus | 35.6 | 83.33 |
| CDX93504 | Canola | nucleus | 54.69 | 57.48 |
| CDY50901 | Canola | nucleus | 53.4 | 55.18 |
| GSMUA_Achr11P... | Banana | nucleus | 40.13 | 53.22 |
| CDY32188 | Canola | nucleus | 57.61 | 52.98 |
| CDY31082 | Canola | nucleus | 57.93 | 51.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.39 | 47.64 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 43.04 | 47.0 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 45.63 | 45.93 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 48.54 | 43.73 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 47.25 | 43.71 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 48.22 | 41.39 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 45.95 | 41.28 |
| KRH68389 | Soybean | nucleus | 55.66 | 41.15 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 48.22 | 40.82 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 47.25 | 40.56 |
| KRG96660 | Soybean | nucleus | 56.31 | 40.09 |
| KRG90431 | Soybean | nucleus | 55.34 | 39.95 |
| Zm00001d024784_P001 | Maize | nucleus | 33.01 | 39.84 |
| KRH33726 | Soybean | nucleus | 55.02 | 39.63 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 47.25 | 39.46 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 55.02 | 38.72 |
| CDY68301 | Canola | nucleus | 41.75 | 38.51 |
| CDX87038 | Canola | nucleus | 42.07 | 38.46 |
| Zm00001d040527_P001 | Maize | nucleus | 34.95 | 38.43 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 46.6 | 37.8 |
| GSMUA_Achr11P... | Banana | nucleus | 45.31 | 37.33 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 45.31 | 37.33 |
| Zm00001d010907_P001 | Maize | nucleus | 51.46 | 37.32 |
| OQU77376 | Sorghum | nucleus | 51.78 | 37.21 |
| Os01t0285300-01 | Rice | nucleus | 51.46 | 37.15 |
| CDY07124 | Canola | nucleus | 40.13 | 36.9 |
| CDY58217 | Canola | nucleus | 40.13 | 36.9 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 51.13 | 36.83 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 51.13 | 36.83 |
| Os05t0140100-01 | Rice | nucleus | 50.81 | 36.77 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 51.13 | 36.74 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 51.13 | 36.66 |
| CDX88230 | Canola | nucleus | 41.75 | 36.24 |
| PGSC0003DMT400047076 | Potato | nucleus | 49.84 | 36.15 |
| CDX80576 | Canola | nucleus | 41.75 | 36.13 |
| EES02806 | Sorghum | nucleus | 49.51 | 35.83 |
| Solyc01g102340.2.1 | Tomato | nucleus | 48.87 | 35.45 |
| Solyc10g044680.1.1 | Tomato | nucleus | 45.31 | 35.18 |
| PGSC0003DMT400040774 | Potato | nucleus | 45.95 | 34.89 |
| CDY08409 | Canola | nucleus | 31.72 | 33.33 |
| CDY42171 | Canola | nucleus | 31.72 | 33.33 |
| CDY42172 | Canola | nucleus | 31.72 | 33.33 |
| CDY53970 | Canola | nucleus | 30.1 | 33.21 |
| CDX78493 | Canola | nucleus | 29.77 | 32.86 |
| CDX91158 | Canola | nucleus | 29.45 | 32.73 |
| CDY43404 | Canola | nucleus | 31.07 | 32.65 |
| CDX85684 | Canola | nucleus | 29.45 | 32.62 |
| CDY50197 | Canola | nucleus | 25.89 | 32.0 |
| CDX94440 | Canola | nucleus | 26.54 | 31.91 |
| CDY32589 | Canola | nucleus | 25.89 | 31.87 |
| CDX89413 | Canola | nucleus | 27.51 | 31.48 |
| CDX92718 | Canola | nucleus | 26.54 | 31.3 |
| CDY38910 | Canola | nucleus | 26.86 | 31.09 |
| CDY64708 | Canola | nucleus | 25.57 | 30.62 |
| CDY05881 | Canola | nucleus | 24.92 | 29.84 |
| CDY27999 | Canola | nucleus | 32.04 | 29.55 |
| CDY35982 | Canola | nucleus | 31.72 | 29.25 |
| CDY37496 | Canola | nucleus | 33.01 | 28.57 |
| CDY39077 | Canola | nucleus | 33.01 | 28.57 |
| CDY55231 | Canola | nucleus | 30.1 | 28.35 |
| CDX74013 | Canola | nucleus | 30.42 | 27.65 |
| CDY70536 | Canola | nucleus | 30.42 | 27.41 |
| CDY08343 | Canola | nucleus | 31.72 | 26.56 |
| CDY38211 | Canola | nucleus | 31.72 | 26.56 |
| CDY25547 | Canola | nucleus | 31.72 | 26.49 |
| CDX97526 | Canola | nucleus | 28.48 | 25.96 |
| CDX97209 | Canola | nucleus | 29.13 | 25.42 |
| CDY34386 | Canola | extracellular | 13.27 | 13.67 |
| CDY70493 | Canola | cytosol, plastid | 3.24 | 7.58 |
| CDY05517 | Canola | plastid | 3.88 | 7.02 |
| CDY70602 | Canola | nucleus, plastid | 3.24 | 6.41 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078G844 | UniProt:A0A078G844 | EnsemblPlants:CDY22635 | ProteinID:CDY22635 |
| ProteinID:CDY22635.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00019304001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF465 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE0BF2 | SEG:seg |
Description
BnaC08g42690DBnaC08g42690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G844]
Coordinates
chrLK032134:-:191740..193167
Molecular Weight (calculated)
34711.4 Da
IEP (calculated)
7.342
GRAVY (calculated)
-0.682
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSGCYKQ KLRKGLWSPD EDEKLLNHIT HHGHGCWSSV PKHAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEENLIVE LHAVLGNRWS QIAAKLPGRT
101: DNEIKNLWNS NIKKKLKQRG IDPNTHKPIS EVDREKPTTS SNDHMSLSSS SATNQDFFHV RPSDFSDYFN SNLGLSVDSS LCSMFPVQFS TGNMVGSVFQ
201: THSCVKPSIS LPPDNSSSTD QAAPNWEFQT NNTSIRPNHN FEDLKWSEYV NTPISLPVFV KSEADYLANV SSLADPWSQS QNESLNTPEA SDVFCKDLQP
301: MAVSFGQSL
101: DNEIKNLWNS NIKKKLKQRG IDPNTHKPIS EVDREKPTTS SNDHMSLSSS SATNQDFFHV RPSDFSDYFN SNLGLSVDSS LCSMFPVQFS TGNMVGSVFQ
201: THSCVKPSIS LPPDNSSSTD QAAPNWEFQT NNTSIRPNHN FEDLKWSEYV NTPISLPVFV KSEADYLANV SSLADPWSQS QNESLNTPEA SDVFCKDLQP
301: MAVSFGQSL
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.