Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029129.1-P | Field mustard | nucleus | 99.63 | 99.63 |
| CDY32589 | Canola | nucleus | 91.01 | 96.81 |
| AT5G52260.1 | Thale cress | nucleus | 79.78 | 79.48 |
| Solyc01g009650.1.1 | Tomato | nucleus | 23.22 | 68.13 |
| CDY50197 | Canola | nucleus | 56.93 | 60.8 |
| CDX92718 | Canola | nucleus | 58.8 | 59.92 |
| CDY05516 | Canola | nucleus | 28.46 | 57.58 |
| CDY05331 | Canola | nucleus | 28.09 | 56.82 |
| CDX89413 | Canola | nucleus | 56.55 | 55.93 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 29.59 | 55.63 |
| CDX94440 | Canola | nucleus | 52.81 | 54.86 |
| KRH35334 | Soybean | nucleus | 38.95 | 38.52 |
| PGSC0003DMT400037080 | Potato | nucleus | 39.7 | 38.13 |
| CDY05881 | Canola | nucleus | 36.33 | 37.6 |
| Solyc03g025870.2.1 | Tomato | nucleus | 38.95 | 37.28 |
| CDY64708 | Canola | nucleus | 35.58 | 36.82 |
| KRH09018 | Soybean | nucleus | 39.7 | 36.43 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 37.08 | 36.13 |
| KRH38485 | Soybean | nucleus | 39.33 | 36.08 |
| TraesCS2D01G366800.1 | Wheat | nucleus | 37.08 | 35.87 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 36.7 | 35.77 |
| TraesCS2A01G370700.1 | Wheat | nucleus | 37.08 | 35.74 |
| TraesCS2A01G370300.1 | Wheat | nucleus | 37.08 | 35.74 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 37.08 | 35.48 |
| TraesCS2D01G367000.1 | Wheat | nucleus | 37.08 | 35.23 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 37.08 | 34.98 |
| TraesCS2D01G366900.1 | Wheat | nucleus | 36.7 | 34.63 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 31.84 | 34.55 |
| Zm00001d051267_P001 | Maize | nucleus | 35.96 | 34.53 |
| Os04t0532800-01 | Rice | nucleus | 35.21 | 34.43 |
| TraesCS2A01G370400.1 | Wheat | nucleus | 36.33 | 34.28 |
| Zm00001d017383_P001 | Maize | nucleus | 36.7 | 33.68 |
| HORVU6Hr1G060600.2 | Barley | mitochondrion | 28.09 | 33.63 |
| TraesCS6A01G236700.1 | Wheat | nucleus | 35.96 | 33.45 |
| VIT_16s0050g00050.t01 | Wine grape | nucleus | 37.08 | 33.22 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 34.46 | 33.09 |
| HORVU2Hr1G091590.1 | Barley | nucleus | 37.08 | 32.57 |
| TraesCS6D01G219300.1 | Wheat | nucleus | 35.58 | 32.2 |
| TraesCS6B01G265200.1 | Wheat | nucleus | 35.58 | 32.2 |
| KRG91494 | Soybean | nucleus | 39.7 | 31.83 |
| EES07547 | Sorghum | nucleus | 36.33 | 31.8 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 34.46 | 31.72 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 32.96 | 31.54 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 32.21 | 31.5 |
| HORVU6Hr1G060610.3 | Barley | nucleus | 36.33 | 31.49 |
| EES06150 | Sorghum | nucleus | 35.21 | 31.44 |
| EES11177 | Sorghum | nucleus | 34.46 | 30.87 |
| TraesCS6B01G053100.1 | Wheat | nucleus | 35.21 | 30.52 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 35.21 | 30.52 |
| HORVU6Hr1G007010.2 | Barley | nucleus | 35.58 | 30.35 |
| Zm00001d014989_P001 | Maize | nucleus | 34.46 | 29.87 |
| TraesCS6D01G043600.1 | Wheat | nucleus | 35.21 | 29.75 |
| CDY08409 | Canola | nucleus | 31.46 | 28.57 |
| CDY42172 | Canola | nucleus | 31.46 | 28.57 |
| CDY42171 | Canola | nucleus | 31.46 | 28.57 |
| CDX85684 | Canola | nucleus | 29.21 | 27.96 |
| CDY53970 | Canola | nucleus | 29.21 | 27.86 |
| CDX93504 | Canola | nucleus | 30.34 | 27.55 |
| CDY43404 | Canola | nucleus | 30.34 | 27.55 |
| CDX78493 | Canola | nucleus | 28.84 | 27.5 |
| CDX91158 | Canola | nucleus | 28.46 | 27.34 |
| CDY50901 | Canola | nucleus | 30.34 | 27.09 |
| CDY22635 | Canola | nucleus | 31.09 | 26.86 |
| TraesCS6A01G037700.1 | Wheat | nucleus | 35.21 | 26.48 |
| CDY06359 | Canola | nucleus | 30.34 | 26.3 |
| CDY32188 | Canola | nucleus | 32.96 | 26.19 |
| CDY31082 | Canola | nucleus | 33.71 | 26.01 |
| CDY68301 | Canola | nucleus | 31.09 | 24.78 |
| CDX87038 | Canola | nucleus | 31.09 | 24.56 |
| CDY07124 | Canola | nucleus | 30.71 | 24.4 |
| CDY58217 | Canola | nucleus | 30.71 | 24.4 |
| CDX88230 | Canola | nucleus | 31.09 | 23.31 |
| CDY27999 | Canola | nucleus | 29.21 | 23.28 |
| CDX80576 | Canola | nucleus | 31.09 | 23.25 |
| CDY35982 | Canola | nucleus | 28.84 | 22.99 |
| CDX74013 | Canola | nucleus | 28.09 | 22.06 |
| CDX97209 | Canola | nucleus | 29.21 | 22.03 |
| CDY70536 | Canola | nucleus | 28.09 | 21.87 |
| CDY55231 | Canola | nucleus | 26.59 | 21.65 |
| CDY39077 | Canola | nucleus | 28.09 | 21.01 |
| CDY37496 | Canola | nucleus | 27.72 | 20.73 |
| CDX97526 | Canola | nucleus | 25.84 | 20.35 |
| CDY25547 | Canola | nucleus | 28.09 | 20.27 |
| CDY08343 | Canola | nucleus | 27.72 | 20.05 |
| CDY38211 | Canola | nucleus | 27.72 | 20.05 |
| CDY34386 | Canola | extracellular | 10.86 | 9.67 |
| CDY70602 | Canola | nucleus, plastid | 2.25 | 3.85 |
| CDY70493 | Canola | cytosol, plastid | 1.87 | 3.79 |
| CDY05517 | Canola | plastid | 1.5 | 2.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HK68 | UniProt:A0A078HK68 | EnsemblPlants:CDY38910 | ProteinID:CDY38910 |
| ProteinID:CDY38910.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00066760001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF563 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF408C | SEG:seg |
Description
BnaA03g12690DBnaA03g12690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK68]
Coordinates
chrLK032434:+:285015..286140
Molecular Weight (calculated)
31023.4 Da
IEP (calculated)
9.028
GRAVY (calculated)
-0.932
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKMTKSGER PKQRQRKGLW SPEEDQKLKS FILSQGHACW TTVPILAGLQ RNGKSCRLRW INYLRPGLKR GTFSAEEEET ILTLHSSLGN KWSRIAKYLP
101: GRTDNEIKNY WHSYLKKGCL KSQPQLKTQR SNLTESSSSP VSCGKRNPET LDHVISFQTL PEKPYSPQSQ GSNKNMMKSN NMPKLFFSEW ITSSDPHVHY
201: SSEFTDSLHI NQTQNRSEDE ELVMIKNSYS SLEDDVMFRT EFQQPHHEYA NYYTSEDFFI NSDVTYM
101: GRTDNEIKNY WHSYLKKGCL KSQPQLKTQR SNLTESSSSP VSCGKRNPET LDHVISFQTL PEKPYSPQSQ GSNKNMMKSN NMPKLFFSEW ITSSDPHVHY
201: SSEFTDSLHI NQTQNRSEDE ELVMIKNSYS SLEDDVMFRT EFQQPHHEYA NYYTSEDFFI NSDVTYM
001: MTKSGERPKQ RQRKGLWSPE EDQKLKSFIL SRGHACWTTV PILAGLQRNG KSCRLRWINY LRPGLKRGSF SEEEEETILT LHSSLGNKWS RIAKYLPGRT
101: DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID
201: YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY ANYYSSGDFF INSDQNYV
101: DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID
201: YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY ANYYSSGDFF INSDQNYV
Arabidopsis Description
AtMYB19MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.