Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32589 | Canola | nucleus | 75.37 | 80.48 |
| CDY38910 | Canola | nucleus | 79.48 | 79.78 |
| Bra029129.1-P | Field mustard | nucleus | 79.48 | 79.78 |
| Solyc01g009650.1.1 | Tomato | nucleus | 22.01 | 64.84 |
| AT4G25560.1 | Thale cress | nucleus | 63.06 | 59.72 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 28.73 | 54.23 |
| KRH35334 | Soybean | nucleus | 39.55 | 39.26 |
| PGSC0003DMT400037080 | Potato | nucleus | 39.93 | 38.49 |
| AT3G48920.1 | Thale cress | nucleus | 36.94 | 37.93 |
| Solyc03g025870.2.1 | Tomato | nucleus | 39.18 | 37.63 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 38.43 | 36.92 |
| TraesCS2A01G370700.1 | Wheat | nucleus | 38.06 | 36.82 |
| TraesCS2D01G367000.1 | Wheat | nucleus | 38.06 | 36.3 |
| TraesCS2D01G366800.1 | Wheat | nucleus | 37.31 | 36.23 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 36.94 | 36.13 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 36.94 | 36.13 |
| TraesCS2A01G370300.1 | Wheat | nucleus | 37.31 | 36.1 |
| KRH09018 | Soybean | nucleus | 39.18 | 36.08 |
| TraesCS2D01G366900.1 | Wheat | nucleus | 38.06 | 36.04 |
| Os04t0532800-01 | Rice | nucleus | 36.57 | 35.9 |
| KRH38485 | Soybean | nucleus | 38.43 | 35.4 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 32.46 | 35.37 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 37.31 | 35.34 |
| TraesCS2A01G370400.1 | Wheat | nucleus | 37.31 | 35.34 |
| Zm00001d051267_P001 | Maize | nucleus | 36.19 | 34.89 |
| Zm00001d017383_P001 | Maize | nucleus | 37.69 | 34.71 |
| VIT_16s0050g00050.t01 | Wine grape | nucleus | 38.06 | 34.23 |
| TraesCS6A01G236700.1 | Wheat | nucleus | 36.19 | 33.8 |
| HORVU6Hr1G060600.2 | Barley | mitochondrion | 27.99 | 33.63 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 34.7 | 33.45 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 34.7 | 33.33 |
| HORVU2Hr1G091590.1 | Barley | nucleus | 37.69 | 33.22 |
| TraesCS6B01G265200.1 | Wheat | nucleus | 36.19 | 32.88 |
| TraesCS6D01G219300.1 | Wheat | nucleus | 36.19 | 32.88 |
| KRG91494 | Soybean | nucleus | 40.67 | 32.73 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 33.21 | 32.6 |
| EES11177 | Sorghum | nucleus | 35.82 | 32.21 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 34.7 | 32.07 |
| HORVU6Hr1G060610.3 | Barley | nucleus | 36.57 | 31.82 |
| EES07547 | Sorghum | nucleus | 36.19 | 31.8 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 35.45 | 30.84 |
| EES06150 | Sorghum | nucleus | 34.33 | 30.77 |
| TraesCS6B01G053100.1 | Wheat | nucleus | 33.96 | 29.55 |
| HORVU6Hr1G007010.2 | Barley | nucleus | 34.33 | 29.39 |
| Zm00001d014989_P001 | Maize | nucleus | 33.58 | 29.22 |
| TraesCS6D01G043600.1 | Wheat | nucleus | 33.96 | 28.8 |
| AT5G12870.1 | Thale cress | nucleus | 29.48 | 28.21 |
| AT1G57560.1 | Thale cress | nucleus | 30.6 | 26.11 |
| TraesCS6A01G037700.1 | Wheat | nucleus | 33.96 | 25.63 |
| AT3G12720.1 | Thale cress | nucleus | 28.73 | 25.08 |
| AT1G09540.1 | Thale cress | nucleus | 32.84 | 24.04 |
| AT5G26660.1 | Thale cress | nucleus | 30.97 | 23.58 |
| AT3G08500.1 | Thale cress | nucleus | 29.85 | 23.32 |
| AT4G01680.2 | Thale cress | nucleus | 30.22 | 23.28 |
| AT3G13890.1 | Thale cress | nucleus | 27.99 | 20.44 |
| AT1G63910.1 | Thale cress | nucleus | 27.99 | 20.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:835302 | ProteinID:AED96193.1 | ArrayExpress:AT5G52260 | EnsemblPlantsGene:AT5G52260 |
| RefSeq:AT5G52260 | TAIR:AT5G52260 | RefSeq:AT5G52260-TAIR-G | EnsemblPlants:AT5G52260.1 | TAIR:AT5G52260.1 | EMBL:AY519636 |
| Symbol:AtMYB19 | ProteinID:BAA97469.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | RefSeq:NP_200039.1 | PFAM:PF00249 | PO:PO:0009005 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF943 | UniProt:Q9LTJ5 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A6CE0 |
| SEG:seg | : | : | : | : | : |
Description
AtMYB19MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5]
Coordinates
chr5:+:21220031..21221288
Molecular Weight (calculated)
31180.3 Da
IEP (calculated)
7.626
GRAVY (calculated)
-0.907
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKSGERPKQ RQRKGLWSPE EDQKLKSFIL SRGHACWTTV PILAGLQRNG KSCRLRWINY LRPGLKRGSF SEEEEETILT LHSSLGNKWS RIAKYLPGRT
101: DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID
201: YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY ANYYSSGDFF INSDQNYV
101: DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID
201: YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY ANYYSSGDFF INSDQNYV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.