Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008206_P001 | Maize | nucleus | 17.76 | 89.04 |
| CDY31082 | Canola | nucleus | 83.33 | 88.15 |
| CDY32188 | Canola | nucleus | 80.87 | 88.1 |
| Bra030783.1-P | Field mustard | nucleus | 82.51 | 87.54 |
| AT1G57560.1 | Thale cress | nucleus | 46.45 | 54.14 |
| GSMUA_Achr11P... | Banana | nucleus | 34.43 | 54.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.89 | 53.09 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 36.61 | 47.35 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 37.7 | 44.95 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 41.8 | 44.48 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 41.26 | 44.02 |
| Zm00001d024784_P001 | Maize | nucleus | 30.6 | 43.75 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 43.72 | 43.24 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 41.8 | 42.5 |
| KRG90431 | Soybean | nucleus | 49.18 | 42.06 |
| Zm00001d040527_P001 | Maize | nucleus | 32.24 | 41.99 |
| KRH33726 | Soybean | nucleus | 49.18 | 41.96 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 37.98 | 41.62 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 40.71 | 41.39 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 40.71 | 40.82 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 41.8 | 40.8 |
| Os05t0140100-01 | Rice | nucleus | 47.54 | 40.75 |
| KRH68389 | Soybean | nucleus | 46.45 | 40.67 |
| Os01t0285300-01 | Rice | nucleus | 46.99 | 40.19 |
| KRG96660 | Soybean | nucleus | 47.54 | 40.09 |
| EES02806 | Sorghum | nucleus | 46.72 | 40.05 |
| OQU77376 | Sorghum | nucleus | 46.99 | 40.0 |
| Zm00001d010907_P001 | Maize | nucleus | 46.45 | 39.91 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 41.53 | 39.9 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 47.81 | 39.86 |
| AT5G26660.1 | Thale cress | nucleus | 38.25 | 39.77 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 46.45 | 39.63 |
| GSMUA_Achr11P... | Banana | nucleus | 40.44 | 39.47 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 46.17 | 39.39 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 46.17 | 39.3 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 46.17 | 39.21 |
| PGSC0003DMT400047076 | Potato | nucleus | 44.81 | 38.5 |
| Solyc01g102340.2.1 | Tomato | nucleus | 44.26 | 38.03 |
| Solyc10g044680.1.1 | Tomato | nucleus | 41.26 | 37.94 |
| AT4G01680.2 | Thale cress | nucleus | 35.79 | 37.64 |
| PGSC0003DMT400040774 | Potato | nucleus | 41.8 | 37.59 |
| AT5G12870.1 | Thale cress | nucleus | 25.68 | 33.57 |
| AT3G12720.1 | Thale cress | nucleus | 27.6 | 32.9 |
| AT5G52260.1 | Thale cress | nucleus | 24.04 | 32.84 |
| AT4G25560.1 | Thale cress | nucleus | 24.32 | 31.45 |
| AT3G48920.1 | Thale cress | nucleus | 21.31 | 29.89 |
| AT3G08500.1 | Thale cress | nucleus | 26.5 | 28.28 |
| AT3G13890.1 | Thale cress | nucleus | 28.14 | 28.07 |
| AT1G63910.1 | Thale cress | nucleus | 28.14 | 27.84 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:837480 | UniProt:A0A178WLE4 | ProteinID:AAC33214.1 | ProteinID:AEE28459.1 |
| EMBL:AF062896 | ArrayExpress:AT1G09540 | EnsemblPlantsGene:AT1G09540 | RefSeq:AT1G09540 | TAIR:AT1G09540 | RefSeq:AT1G09540-TAIR-G |
| EnsemblPlants:AT1G09540.1 | TAIR:AT1G09540.1 | EMBL:AY063939 | EMBL:AY096523 | EMBL:AY519552 | Unigene:At.10913 |
| GO:GO:0000003 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009791 | GO:GO:0009987 |
| GO:GO:0010087 | GO:GO:0010089 | GO:GO:0010119 | GO:GO:0010214 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | GO:GO:0048364 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB61 | InterPro:Myb_dom |
| RefSeq:NP_172425.2 | ProteinID:OAP19004.1 | PFAM:PF00249 | PO:PO:0000293 | PO:PO:0005352 | PO:PO:0009005 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF910 | UniProt:Q8VZQ2 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00000A4B54 | SEG:seg | : | : | : |
Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
Coordinates
chr1:+:3086101..3087914
Molecular Weight (calculated)
40893.5 Da
IEP (calculated)
8.073
GRAVY (calculated)
-0.732
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.