Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97526 | Canola | nucleus | 77.38 | 83.78 |
| Bra021515.1-P | Field mustard | nucleus | 79.02 | 81.46 |
| Bra027389.1-P | Field mustard | nucleus | 77.11 | 81.32 |
| CDY39077 | Canola | nucleus | 79.02 | 81.23 |
| CDY37496 | Canola | nucleus | 79.02 | 81.23 |
| CDY55231 | Canola | nucleus | 70.3 | 78.66 |
| VIT_09s0002g01670.t01 | Wine grape | nucleus | 40.33 | 47.9 |
| PGSC0003DMT400087467 | Potato | nucleus | 35.69 | 47.64 |
| KRH10036 | Soybean | nucleus | 43.6 | 45.33 |
| KRH44125 | Soybean | nucleus | 42.23 | 44.41 |
| KRH47101 | Soybean | nucleus | 42.51 | 44.32 |
| Solyc03g121740.1.1 | Tomato | nucleus | 39.78 | 40.0 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 32.43 | 39.8 |
| HORVU3Hr1G066860.11 | Barley | nucleus | 29.16 | 36.39 |
| TraesCS3D01G251600.1 | Wheat | nucleus | 28.88 | 36.18 |
| TraesCS3A01G251200.1 | Wheat | nucleus | 28.88 | 36.18 |
| Os01t0709000-01 | Rice | nucleus | 29.7 | 35.5 |
| TraesCS3B01G280700.1 | Wheat | nucleus | 26.43 | 33.92 |
| AT3G12720.1 | Thale cress | nucleus | 28.34 | 33.88 |
| EES03504 | Sorghum | nucleus | 29.43 | 33.86 |
| AT5G12870.1 | Thale cress | nucleus | 25.07 | 32.86 |
| AT1G57560.1 | Thale cress | nucleus | 26.43 | 30.89 |
| AT4G01680.2 | Thale cress | nucleus | 27.79 | 29.31 |
| AT4G25560.1 | Thale cress | nucleus | 22.07 | 28.62 |
| AT1G63910.1 | Thale cress | nucleus | 28.61 | 28.38 |
| AT3G48920.1 | Thale cress | nucleus | 20.16 | 28.35 |
| AT3G08500.1 | Thale cress | nucleus | 26.43 | 28.28 |
| AT1G09540.1 | Thale cress | nucleus | 28.07 | 28.14 |
| AT5G52260.1 | Thale cress | nucleus | 20.44 | 27.99 |
| AT5G26660.1 | Thale cress | nucleus | 26.7 | 27.84 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:820602 | ProteinID:AEE75433.1 | ProteinID:AEE75434.1 | EMBL:AF175997 |
| ArrayExpress:AT3G13890 | EnsemblPlantsGene:AT3G13890 | RefSeq:AT3G13890 | TAIR:AT3G13890 | RefSeq:AT3G13890-TAIR-G | EnsemblPlants:AT3G13890.1 |
| TAIR:AT3G13890.1 | EMBL:AY519588 | Unigene:At.5633 | ProteinID:BAB02319.1 | EMBL:DQ446661 | EMBL:DQ653083 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009834 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB26 | InterPro:Myb_dom | RefSeq:NP_001078147.1 |
| RefSeq:NP_566467.2 | PFAM:PF00249 | PO:PO:0000056 | PO:PO:0001170 | PO:PO:0009056 | PO:PO:0009066 |
| PO:PO:0009067 | PO:PO:0009071 | PO:PO:0009074 | PO:PO:0020002 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF901 | UniProt:Q9SPG3 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000AB4D3 |
| SEG:seg | : | : | : | : | : |
Description
MYB26Transcription factor MYB26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG3]
Coordinates
chr3:-:4576740..4578027
Molecular Weight (calculated)
41578.7 Da
IEP (calculated)
7.782
GRAVY (calculated)
-0.641
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGTYTHI HGFCLQRCGK SCRLRWINYL RPDLKRGSFS PQEAALIIEL HSILGNRWAQ
101: IAKHLPGRTD NEVKNFWNSS IKKKLMSHHH HGHHHHHLSS MASLLTNLPY HNGFNPTTVD DESSRFMSNI ITNTNPNFIT PSHLSLPSPH VMTPLMFPTS
201: REGDFKFLTT NNPNQSHHHD NNHYNNLDIL SPTPTINNHH QPSLSSCPHD NNLQWPALPD FPASTISGFQ ETLQDYDDAN KLNVFVTPFN DNAKKLLCGE
301: VLEGKVLSSS SPISQDHGLF LPTTYNFQMT STSDHQHHHR VDSYINHMII PSSSSSSPIS CGQYVIT
101: IAKHLPGRTD NEVKNFWNSS IKKKLMSHHH HGHHHHHLSS MASLLTNLPY HNGFNPTTVD DESSRFMSNI ITNTNPNFIT PSHLSLPSPH VMTPLMFPTS
201: REGDFKFLTT NNPNQSHHHD NNHYNNLDIL SPTPTINNHH QPSLSSCPHD NNLQWPALPD FPASTISGFQ ETLQDYDDAN KLNVFVTPFN DNAKKLLCGE
301: VLEGKVLSSS SPISQDHGLF LPTTYNFQMT STSDHQHHHR VDSYINHMII PSSSSSSPIS CGQYVIT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.