Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G251600.1 | Wheat | nucleus | 97.61 | 97.61 |
| TraesCS3B01G280700.1 | Wheat | nucleus | 92.83 | 95.1 |
| HORVU3Hr1G066860.11 | Barley | nucleus | 91.81 | 91.5 |
| Os01t0709000-01 | Rice | nucleus | 80.55 | 76.87 |
| EES03504 | Sorghum | nucleus | 75.77 | 69.59 |
| PGSC0003DMT400087467 | Potato | nucleus | 35.49 | 37.82 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 36.86 | 36.12 |
| TraesCS1A01G366100.1 | Wheat | nucleus | 35.15 | 35.27 |
| TraesCS1A01G365900.1 | Wheat | nucleus | 35.49 | 35.02 |
| VIT_09s0002g01670.t01 | Wine grape | nucleus | 36.86 | 34.95 |
| TraesCS1A01G366300.1 | Wheat | nucleus | 33.79 | 34.26 |
| TraesCS1A01G366200.1 | Wheat | nucleus | 34.47 | 34.12 |
| TraesCS2A01G152900.1 | Wheat | nucleus | 26.96 | 33.05 |
| TraesCS3A01G200300.1 | Wheat | nucleus | 33.79 | 32.78 |
| KRH44125 | Soybean | nucleus | 38.57 | 32.38 |
| TraesCS1A01G366000.1 | Wheat | nucleus | 30.72 | 32.14 |
| KRH47101 | Soybean | nucleus | 38.57 | 32.1 |
| TraesCS3A01G254500.1 | Wheat | nucleus | 33.79 | 31.33 |
| KRH10036 | Soybean | nucleus | 37.2 | 30.88 |
| CDY55231 | Canola | nucleus | 34.47 | 30.79 |
| TraesCS2A01G370300.1 | Wheat | nucleus | 29.01 | 30.69 |
| TraesCS4A01G411900.1 | Wheat | nucleus | 25.94 | 30.04 |
| TraesCS2A01G370400.1 | Wheat | nucleus | 29.01 | 30.04 |
| Bra021515.1-P | Field mustard | nucleus | 36.18 | 29.78 |
| CDY37496 | Canola | nucleus | 36.18 | 29.69 |
| CDY39077 | Canola | nucleus | 36.18 | 29.69 |
| TraesCS6A01G236700.1 | Wheat | nucleus | 29.01 | 29.62 |
| TraesCS2A01G370700.1 | Wheat | nucleus | 27.99 | 29.6 |
| TraesCS7A01G304500.1 | Wheat | nucleus | 34.47 | 29.45 |
| CDX97526 | Canola | nucleus | 33.79 | 29.2 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 42.66 | 29.07 |
| AT3G13890.1 | Thale cress | nucleus | 36.18 | 28.88 |
| Solyc03g121740.1.1 | Tomato | nucleus | 35.84 | 28.77 |
| TraesCS2A01G230400.1 | Wheat | nucleus | 37.2 | 28.76 |
| Bra027389.1-P | Field mustard | nucleus | 33.79 | 28.45 |
| TraesCS7A01G333200.1 | Wheat | nucleus | 23.55 | 27.71 |
| TraesCS2A01G152700.1 | Wheat | nucleus | 33.11 | 26.72 |
| TraesCS3A01G094300.1 | Wheat | nucleus | 24.91 | 26.26 |
| TraesCS6A01G037700.1 | Wheat | nucleus | 29.01 | 23.94 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 30.03 | 22.62 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G251200.1 | EnsemblPlantsGene:TraesCS3A01G251200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF656 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:470828561..470830017
Molecular Weight (calculated)
31214.8 Da
IEP (calculated)
7.478
GRAVY (calculated)
-0.197
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHSCCNKQ KVRRGLWSPE EDEKLVKYIT AHGHGCWSSV PRQAGLQRCG KSCRLRWINY LRPDLKRGSF SQEEEALIVD LHRVLGNRWA QIAKHLPGRT
101: DNEVKNFWNS TIKKKLISQA VGSLHYGNIP SSADLYYNIL DGAGQGIAAA GCASLNALDN AAQAVATQSP PSSAAWLNFT SQPLLLPVHG AVPGCDLQYT
201: VDGEFIRLCH AAANACPENG ASSLLAQEGG ADRSCLPVFA EPKGAGAFAA DPGMGPVADF MDAILGSSST SAASVSSVDS FSANTGMQLH WVP
101: DNEVKNFWNS TIKKKLISQA VGSLHYGNIP SSADLYYNIL DGAGQGIAAA GCASLNALDN AAQAVATQSP PSSAAWLNFT SQPLLLPVHG AVPGCDLQYT
201: VDGEFIRLCH AAANACPENG ASSLLAQEGG ADRSCLPVFA EPKGAGAFAA DPGMGPVADF MDAILGSSST SAASVSSVDS FSANTGMQLH WVP
001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGLQRCG KSCRLRWINY LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT
101: DNEVKNFWNS SIKKKLMSHH HHGHHHHHLS SMASLLTNLP YHNGFNPTTV DDESSRFMSN IITNTNPNFI TPSHLSLPSP HVMTPLMFPT SREGDFKFLT
201: TNNPNQSHHH DNNHYNNLDI LSPTPTINNH HQPSLSSCPH DNNLQWPALP DFPASTISGF QETLQDYDDA NKLNVFVTPF NDNAKKLLCG EVLEGKVLSS
301: SSPISQDHGL FLPTTYNFQM TSTSDHQHHH RVDSYINHMI IPSSSSSSPI SCGQYVIT
101: DNEVKNFWNS SIKKKLMSHH HHGHHHHHLS SMASLLTNLP YHNGFNPTTV DDESSRFMSN IITNTNPNFI TPSHLSLPSP HVMTPLMFPT SREGDFKFLT
201: TNNPNQSHHH DNNHYNNLDI LSPTPTINNH HQPSLSSCPH DNNLQWPALP DFPASTISGF QETLQDYDDA NKLNVFVTPF NDNAKKLLCG EVLEGKVLSS
301: SSPISQDHGL FLPTTYNFQM TSTSDHQHHH RVDSYINHMI IPSSSSSSPI SCGQYVIT
Arabidopsis Description
MYB26Transcription factor MYB26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.