Factsheet for Bra021515.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39077	Canola	nucleus	100.0	99.72
CDY37496	Canola	nucleus	97.75	97.48
Bra027389.1-P	Field mustard	nucleus	79.49	81.32
AT3G13890.1	Thale cress	nucleus	81.46	79.02
PGSC0003DMT400087467	Potato	nucleus	37.64	48.73
VIT_09s0002g01670.t01	Wine grape	nucleus	40.17	46.28
KRH44125	Soybean	nucleus	45.22	46.13
KRH47101	Soybean	nucleus	44.94	45.45
KRH10036	Soybean	nucleus	44.38	44.76
Solyc03g121740.1.1	Tomato	nucleus	41.85	40.82
GSMUA_Achr6P35800_001	Banana	nucleus	33.99	40.47
Bra013900.1-P	Field mustard	nucleus	22.19	36.74
Bra039339.1-P	Field mustard	nucleus	30.34	36.73
HORVU3Hr1G066860.11	Barley	nucleus	30.06	36.39
TraesCS3A01G251200.1	Wheat	nucleus	29.78	36.18
TraesCS3D01G251600.1	Wheat	nucleus	29.78	36.18
Os01t0709000-01	Rice	nucleus	30.9	35.83
Bra034738.1-P	Field mustard	nucleus	29.21	35.37
EES03504	Sorghum	nucleus	30.34	33.86
TraesCS3B01G280700.1	Wheat	nucleus	26.97	33.57
Bra008875.1-P	Field mustard	nucleus	25.56	32.5
Bra006166.1-P	Field mustard	nucleus	24.72	31.43
Bra036317.1-P	Field mustard	nucleus	29.49	31.25
Bra020016.1-P	Field mustard	nucleus	28.93	31.02
Bra030783.1-P	Field mustard	nucleus	29.78	30.72
Bra031669.1-P	Field mustard	nucleus	28.09	30.58
Bra036588.1-P	Field mustard	nucleus	28.37	30.15
Bra027771.1-P	Field mustard	nucleus	30.34	29.51
Bra018027.1-P	Field mustard	nucleus	21.35	29.46
Bra027668.1-P	Field mustard	nucleus	29.78	28.73
Bra029129.1-P	Field mustard	nucleus	21.07	28.09
Bra029696.1-P	Field mustard	nucleus	25.84	27.63
Bra001284.1-P	Field mustard	nucleus	25.0	26.18
Bra009910.1-P	Field mustard	nucleus	21.35	23.03
Bra020526.1-P	Field mustard	nucleus	26.97	21.82
Bra019154.1-P	Field mustard	nucleus	22.47	17.35
Bra023380.1-P	Field mustard	nucleus	9.83	16.83

Protein Annotations

EnsemblPlants:Bra021515.1	EnsemblPlants:Bra021515.1-P	EnsemblPlantsGene:Bra021515	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF901	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002544563	UniProt:M4DYB9	MapMan:15.5.2.1	:	:

Description

AT3G13890 (E=1e-138) MYB26 | ATMYB26 (MYB DOMAIN PROTEIN 26); DNA binding / transcription factor

Coordinates

chrA01:+:24840954..24842231

Molecular Weight (calculated)

40359.4 Da

IEP (calculated)

7.510

GRAVY (calculated)

-0.620

Length

356 amino acids

Sequence
(BLAST)

001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN TYGHGCWSSV PKHAGIYIGL QRCGKSCRLR WINYLRPDLK RGSFSPQEAA LIIELHSILG NRWAQIAKHL
101: PGRTDNEVKN FWNSSIKKKL MSHHYHHHHG HHHHHTSSMA SLLTNLPYHN VFNGTVGDDE GSRFMSSFIA NTNPNFITPN HLPLPSHVMT PLMFPTSREG
201: DVKYLTTTNT NQSHQDNNLS TNLDIFSATP FINNHHHHHD NDPQWPSLPD LPASTISPFH ESLHDYDDGD KLNVFVTPHN DNGDPRNFPL VATKLLCGQV
301: LEGKAISQDH CLLLPTTYDL QMHGDYRRVD SYINHMVIPS SSSSSSPISC GQYVIT

Best Arabidopsis Sequence Match ( AT3G13890.1 )
(BLAST)

001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGTYTHI HGFCLQRCGK SCRLRWINYL RPDLKRGSFS PQEAALIIEL HSILGNRWAQ
101: IAKHLPGRTD NEVKNFWNSS IKKKLMSHHH HGHHHHHLSS MASLLTNLPY HNGFNPTTVD DESSRFMSNI ITNTNPNFIT PSHLSLPSPH VMTPLMFPTS
201: REGDFKFLTT NNPNQSHHHD NNHYNNLDIL SPTPTINNHH QPSLSSCPHD NNLQWPALPD FPASTISGFQ ETLQDYDDAN KLNVFVTPFN DNAKKLLCGE
301: VLEGKVLSSS SPISQDHGLF LPTTYNFQMT STSDHQHHHR VDSYINHMII PSSSSSSPIS CGQYVIT

Arabidopsis Description

MYB26Transcription factor MYB26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.