Factsheet for Bra001284.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74013	Canola	nucleus	100.0	100.0
CDY70536	Canola	nucleus	97.35	96.5
Bra029696.1-P	Field mustard	nucleus	84.71	86.49
AT3G08500.1	Thale cress	nucleus	82.94	82.22
KRH20828	Soybean	nucleus	47.35	51.77
KRH27485	Soybean	nucleus	47.65	51.43
KRG93751	Soybean	nucleus	47.65	48.21
VIT_13s0064g00960.t01	Wine grape	nucleus	40.59	47.75
KRH18309	Soybean	nucleus	46.76	46.63
GSMUA_Achr8P31350_001	Banana	nucleus	38.24	46.59
Bra008875.1-P	Field mustard	nucleus	35.88	43.57
GSMUA_AchrUn_...	Banana	nucleus	36.18	43.46
Bra006166.1-P	Field mustard	nucleus	35.59	43.21
GSMUA_Achr2P07780_001	Banana	nucleus	37.65	43.1
Solyc11g065840.1.1	Tomato	nucleus	44.12	42.49
PGSC0003DMT400018995	Potato	nucleus	43.82	42.45
Bra013900.1-P	Field mustard	nucleus	21.76	34.42
Bra023380.1-P	Field mustard	nucleus	18.53	30.29
Bra031669.1-P	Field mustard	nucleus	27.65	28.75
Bra029129.1-P	Field mustard	nucleus	22.35	28.46
Bra036588.1-P	Field mustard	nucleus	27.94	28.36
Bra039339.1-P	Field mustard	nucleus	24.41	28.23
Bra034738.1-P	Field mustard	nucleus	24.41	28.23
Bra020016.1-P	Field mustard	nucleus	27.06	27.71
Bra030783.1-P	Field mustard	nucleus	27.94	27.54
Bra018027.1-P	Field mustard	nucleus	20.59	27.13
Bra036317.1-P	Field mustard	nucleus	25.59	25.89
Bra021515.1-P	Field mustard	nucleus	26.18	25.0
Bra027771.1-P	Field mustard	nucleus	26.18	24.32
Bra027668.1-P	Field mustard	nucleus	25.29	23.31
Bra027389.1-P	Field mustard	nucleus	23.82	23.28
Bra009910.1-P	Field mustard	nucleus	21.76	22.42
Bra020526.1-P	Field mustard	nucleus	27.35	21.14
Bra019154.1-P	Field mustard	nucleus	21.76	16.05

Protein Annotations

EnsemblPlants:Bra001284.1	EnsemblPlants:Bra001284.1-P	EnsemblPlantsGene:Bra001284	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF888	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002540542	UniProt:M4CAQ5	MapMan:15.5.2.1	:	:

Description

AT3G08500 (E=2e-152) MYB83, AtMYB83 | MYB83 (myb domain protein 83); DNA binding / transcription factor

Coordinates

chrA03:-:15675153..15676383

Molecular Weight (calculated)

38246.9 Da

IEP (calculated)

6.732

GRAVY (calculated)

-0.692

Length

340 amino acids

Sequence
(BLAST)

001: MMMRNQDITT IRDKKKPTHA CGGSNNKPKL RKGLWSPDED ERLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIIHFH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRFKNNNNN TSSGSSPNNS NSNSLDLRDQ HVEMGGKSNS MMGSYHHHHD DMMIMGNTMG MDSSSFHFAP
201: VVSGLGLNQL DPLISVPDHS QYQQMGNTGN VFNANGLGDY GNAILDPISK RASVESEWFL PASENINAIP CTTSNNLNVE VLDPCFNSKT MCHSESFKVG
301: NMFGMENASW ETENPKIGDW DLDGLIDNNS SFPFLDFQVD

Best Arabidopsis Sequence Match ( AT3G08500.1 )
(BLAST)

001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD

Arabidopsis Description

MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.