Factsheet for Bra020526.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05517	Canola	plastid	38.86	100.0
CDY05516	Canola	nucleus	28.86	96.21
CDY05331	Canola	nucleus	28.64	95.45
Zm00001d008206_P001	Maize	nucleus	14.32	86.3
AT5G26660.1	Thale cress	nucleus	62.27	77.84
Bra036588.1-P	Field mustard	nucleus	58.64	77.01
Bra009910.1-P	Field mustard	nucleus	55.23	73.64
GSMUA_Achr11P...	Banana	nucleus	23.86	45.06
GSMUA_AchrUn_...	Banana	nucleus	27.27	43.64
GSMUA_Achr4P19560_001	Banana	nucleus	27.5	42.76
Bra031669.1-P	Field mustard	nucleus	29.77	40.06
GSMUA_Achr2P01830_001	Banana	nucleus	27.73	39.74
Zm00001d024784_P001	Maize	nucleus	22.95	39.45
GSMUA_Achr7P17250_001	Banana	nucleus	30.45	39.07
Bra020016.1-P	Field mustard	nucleus	29.32	38.86
Bra030783.1-P	Field mustard	nucleus	30.23	38.55
GSMUA_Achr1P25120_001	Banana	nucleus	30.68	37.5
Bra036317.1-P	Field mustard	nucleus	27.95	36.61
GSMUA_Achr1P18990_001	Banana	nucleus	27.73	36.53
GSMUA_Achr3P24580_001	Banana	nucleus	28.41	36.34
Zm00001d010907_P001	Maize	nucleus	35.0	36.15
Zm00001d040527_P001	Maize	nucleus	22.73	35.59
Os01t0285300-01	Rice	nucleus	34.55	35.51
Os05t0140100-01	Rice	nucleus	34.32	35.36
OQU77376	Sorghum	nucleus	34.55	35.35
EES02806	Sorghum	nucleus	34.09	35.13
HORVU1Hr1G017970.4	Barley	nucleus	34.09	34.97
TraesCS1D01G084400.1	Wheat	nucleus	33.86	34.73
GSMUA_Achr3P12200_001	Banana	nucleus	28.41	34.72
TraesCS1A01G083100.2	Wheat	nucleus	33.86	34.65
TraesCS1B01G100600.1	Wheat	nucleus	33.86	34.57
GSMUA_Achr2P18440_001	Banana	nucleus	28.64	34.52
Bra013900.1-P	Field mustard	nucleus	16.82	34.42
GSMUA_Achr8P18730_001	Banana	nucleus	28.41	33.78
GSMUA_Achr11P...	Banana	nucleus	28.41	33.33
GSMUA_Achr5P18400_001	Banana	nucleus	28.41	33.33
Bra008875.1-P	Field mustard	nucleus	20.91	32.86
VIT_14s0060g00240.t01	Wine grape	nucleus	32.73	32.8
KRH33726	Soybean	nucleus	31.82	32.63
GSMUA_Achr2P07930_001	Banana	nucleus	28.18	32.55
KRG90431	Soybean	nucleus	31.59	32.48
Bra034738.1-P	Field mustard	nucleus	21.59	32.31
KRH68389	Soybean	nucleus	30.68	32.3
KRG96660	Soybean	nucleus	31.59	32.03
Bra039339.1-P	Field mustard	nucleus	21.36	31.97
PGSC0003DMT400040774	Potato	nucleus	29.55	31.94
Solyc10g044680.1.1	Tomato	nucleus	28.64	31.66
PGSC0003DMT400047076	Potato	nucleus	30.45	31.46
Bra006166.1-P	Field mustard	nucleus	20.0	31.43
Solyc01g102340.2.1	Tomato	nucleus	29.77	30.75
Bra029129.1-P	Field mustard	nucleus	18.41	30.34
Bra029696.1-P	Field mustard	nucleus	22.05	29.13
Bra018027.1-P	Field mustard	nucleus	16.82	28.68
Bra001284.1-P	Field mustard	nucleus	21.14	27.35
Bra021515.1-P	Field mustard	nucleus	21.82	26.97
Bra027771.1-P	Field mustard	nucleus	22.05	26.5
Bra027668.1-P	Field mustard	nucleus	21.36	25.47
Bra027389.1-P	Field mustard	nucleus	20.0	25.29
Bra023380.1-P	Field mustard	nucleus	8.41	17.79
Bra019154.1-P	Field mustard	nucleus	17.5	16.7

Protein Annotations

EnsemblPlants:Bra020526.1	EnsemblPlants:Bra020526.1-P	EnsemblPlantsGene:Bra020526	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF474	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002546E68	UniProt:M4DVI2	MapMan:15.5.2.1	:	:

Description

AT5G26660 (E=1e-093) ATMYB4, ATMYB86 | ATMYB86 (MYB DOMAIN PROTEIN 86); specific transcriptional repressor/ transcription repressor

Coordinates

chrA02:-:24763834..24770569

Molecular Weight (calculated)

49232.3 Da

IEP (calculated)

10.246

GRAVY (calculated)

-0.782

Length

440 amino acids

Sequence
(BLAST)

001: MDVPNQMEGS GQSLRMEDQP VAPRRGRKPT AAKATGKAAG KRVVVDKPPL KKRVLKSPTQ ATAPKKRRTT RAQGSPRRKN TTTSKGGAQT SGQAPPTVPF
101: PSSTRQGHSC CYKQKLRKGL WSPEEDEKLL NYITRHGHGC WSSVPKLAGL QRCGKNCRLR WINYLRPDLK RGAFSQDEES LIIELHAALG NRWSQIATRL
201: PGRTDNEIKN FWNSCLKKKL KIKGIDPTTH KPLVSDLQTL NVIDQKLTSS TTSEVSKSTS LIINNHDQSM VISSQPGPCW FPEIKTTANQ NVAFCFSSST
301: TTPTVLDQMS SNFNPVPNNW ELSYCKNTVP SQRNSIYNAF FGNHYTEASQ IMNNNNNHVM DPHYHQDMKS WPSEILHYTE HNQSSETGLK AEVKPDIAKY
401: YLGSSSSLNE SAARLLHNAE VDLYGTNLQK LNNMAFHQSL

Best Arabidopsis Sequence Match ( AT5G26660.1 )
(BLAST)

001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL

Arabidopsis Description

MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.