Factsheet for Bra027668.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027771.1-P	Field mustard	nucleus	85.64	86.34
VIT_02s0025g00320.t01	Wine grape	nucleus	48.78	59.21
KRH27893	Soybean	nucleus	52.03	59.08
KRH77586	Soybean	nucleus	52.03	58.9
GSMUA_Achr10P...	Banana	nucleus	40.92	50.84
Solyc08g081500.1.1	Tomato	nucleus	43.9	48.94
GSMUA_Achr6P36930_001	Banana	nucleus	40.38	47.91
HORVU7Hr1G072450.2	Barley	nucleus	41.73	45.16
TraesCS7B01G204800.1	Wheat	nucleus	42.01	44.93
TraesCS7D01G300000.1	Wheat	nucleus	41.73	44.9
TraesCS7A01G304500.1	Wheat	nucleus	41.73	44.9
EES13346	Sorghum	nucleus	40.38	42.21
Os08t0151300-01	Rice	nucleus	40.92	42.06
Zm00001d024630_P002	Maize	nucleus	39.57	40.33
Bra013900.1-P	Field mustard	nucleus	20.05	34.42
Bra034738.1-P	Field mustard	nucleus	25.47	31.97
Bra039339.1-P	Field mustard	nucleus	25.2	31.63
Bra020016.1-P	Field mustard	nucleus	27.1	30.12
Bra021515.1-P	Field mustard	nucleus	28.73	29.78
Bra031669.1-P	Field mustard	nucleus	26.29	29.66
Bra030783.1-P	Field mustard	nucleus	27.64	29.57
Bra006166.1-P	Field mustard	nucleus	22.22	29.29
Bra008875.1-P	Field mustard	nucleus	22.22	29.29
Bra018027.1-P	Field mustard	nucleus	20.05	28.68
Bra036317.1-P	Field mustard	nucleus	26.02	28.57
Bra036588.1-P	Field mustard	nucleus	25.75	28.36
Bra027389.1-P	Field mustard	nucleus	26.02	27.59
Bra029129.1-P	Field mustard	nucleus	19.78	27.34
Bra029696.1-P	Field mustard	nucleus	23.04	25.53
Bra001284.1-P	Field mustard	nucleus	23.31	25.29
Bra009910.1-P	Field mustard	nucleus	20.05	22.42
Bra020526.1-P	Field mustard	nucleus	25.47	21.36
Bra019154.1-P	Field mustard	nucleus	20.33	16.27
Bra023380.1-P	Field mustard	nucleus	8.67	15.38

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra027668	EnsemblPlants:Bra027668.1	EnsemblPlants:Bra027668.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4EFV5
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF451	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002542397	SEG:seg	:	:

Description

AT1G63910 (E=8e-158) AtMYB103 | AtMYB103 (myb domain protein 103); DNA binding / transcription activator/ transcription factor

Coordinates

chrA09:+:7020347..7022419

Molecular Weight (calculated)

41984.8 Da

IEP (calculated)

6.624

GRAVY (calculated)

-0.731

Length

369 amino acids

Sequence
(BLAST)

001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIPSHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYNRHQPSK TTVTLNVEAT STVTALPSTT TTSTIDNLHF DGFMDSPNQL NFPYDQETNA KIQEALFSHK PHLFMLDTTL
201: PVLEGMFSQN IITNNNNNNN DYDTQTGGRG SVFEQSFLTH NTEQGDMNLP QQERFQLPTM VSNLFSNSTN SNTETVTSYK LPALVGGNLN NISQVDNNNA
301: QDGDIASTFE CLRKQELNYD EWINSQQCSN FFFWDNLNIN VEGSSLVGNQ DPSMTLGSSA LSSSFPSSF

Best Arabidopsis Sequence Match ( AT1G63910.1 )
(BLAST)

001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF

Arabidopsis Description

AtMYB103MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.