Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38910 | Canola | nucleus | 99.63 | 99.63 |
| CDY32589 | Canola | nucleus | 91.39 | 97.21 |
| AT5G52260.1 | Thale cress | nucleus | 79.78 | 79.48 |
| Solyc01g009650.1.1 | Tomato | nucleus | 23.22 | 68.13 |
| Bra013900.1-P | Field mustard | nucleus | 49.44 | 61.4 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 29.59 | 55.63 |
| KRH35334 | Soybean | nucleus | 38.95 | 38.52 |
| PGSC0003DMT400037080 | Potato | nucleus | 39.7 | 38.13 |
| Solyc03g025870.2.1 | Tomato | nucleus | 38.95 | 37.28 |
| Bra018027.1-P | Field mustard | nucleus | 35.58 | 36.82 |
| KRH09018 | Soybean | nucleus | 39.7 | 36.43 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 37.08 | 36.13 |
| KRH38485 | Soybean | nucleus | 39.33 | 36.08 |
| TraesCS2D01G366800.1 | Wheat | nucleus | 37.08 | 35.87 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 36.7 | 35.77 |
| TraesCS2A01G370700.1 | Wheat | nucleus | 37.08 | 35.74 |
| TraesCS2A01G370300.1 | Wheat | nucleus | 37.08 | 35.74 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 37.08 | 35.48 |
| TraesCS2D01G367000.1 | Wheat | nucleus | 37.08 | 35.23 |
| Bra019154.1-P | Field mustard | nucleus | 60.67 | 35.14 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 37.08 | 34.98 |
| TraesCS2D01G366900.1 | Wheat | nucleus | 36.7 | 34.63 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 31.84 | 34.55 |
| Zm00001d051267_P001 | Maize | nucleus | 35.96 | 34.53 |
| Os04t0532800-01 | Rice | nucleus | 35.21 | 34.43 |
| TraesCS2A01G370400.1 | Wheat | nucleus | 36.33 | 34.28 |
| Zm00001d017383_P001 | Maize | nucleus | 36.7 | 33.68 |
| HORVU6Hr1G060600.2 | Barley | mitochondrion | 28.09 | 33.63 |
| TraesCS6A01G236700.1 | Wheat | nucleus | 35.96 | 33.45 |
| VIT_16s0050g00050.t01 | Wine grape | nucleus | 37.08 | 33.22 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 34.46 | 33.09 |
| HORVU2Hr1G091590.1 | Barley | nucleus | 37.08 | 32.57 |
| TraesCS6B01G265200.1 | Wheat | nucleus | 35.58 | 32.2 |
| TraesCS6D01G219300.1 | Wheat | nucleus | 35.58 | 32.2 |
| KRG91494 | Soybean | nucleus | 39.7 | 31.83 |
| EES07547 | Sorghum | nucleus | 36.33 | 31.8 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 34.46 | 31.72 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 32.96 | 31.54 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 32.21 | 31.5 |
| HORVU6Hr1G060610.3 | Barley | nucleus | 36.33 | 31.49 |
| EES06150 | Sorghum | nucleus | 35.21 | 31.44 |
| EES11177 | Sorghum | nucleus | 34.46 | 30.87 |
| TraesCS6B01G053100.1 | Wheat | nucleus | 35.21 | 30.52 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 35.21 | 30.52 |
| HORVU6Hr1G007010.2 | Barley | nucleus | 35.58 | 30.35 |
| Zm00001d014989_P001 | Maize | nucleus | 34.46 | 29.87 |
| TraesCS6D01G043600.1 | Wheat | nucleus | 35.21 | 29.75 |
| Bra034738.1-P | Field mustard | nucleus | 31.46 | 28.57 |
| Bra008875.1-P | Field mustard | nucleus | 29.59 | 28.21 |
| Bra006166.1-P | Field mustard | nucleus | 29.21 | 27.86 |
| Bra039339.1-P | Field mustard | nucleus | 30.34 | 27.55 |
| TraesCS6A01G037700.1 | Wheat | nucleus | 35.21 | 26.48 |
| Bra030783.1-P | Field mustard | nucleus | 33.71 | 26.09 |
| Bra036588.1-P | Field mustard | nucleus | 31.09 | 24.78 |
| Bra031669.1-P | Field mustard | nucleus | 30.34 | 24.77 |
| Bra020016.1-P | Field mustard | nucleus | 30.71 | 24.7 |
| Bra036317.1-P | Field mustard | nucleus | 30.71 | 24.4 |
| Bra029696.1-P | Field mustard | nucleus | 28.84 | 23.12 |
| Bra001284.1-P | Field mustard | nucleus | 28.46 | 22.35 |
| Bra021515.1-P | Field mustard | nucleus | 28.09 | 21.07 |
| Bra027771.1-P | Field mustard | nucleus | 28.09 | 20.49 |
| Bra027389.1-P | Field mustard | nucleus | 25.84 | 19.83 |
| Bra027668.1-P | Field mustard | nucleus | 27.34 | 19.78 |
| Bra009910.1-P | Field mustard | nucleus | 24.34 | 19.7 |
| Bra020526.1-P | Field mustard | nucleus | 30.34 | 18.41 |
| Bra023380.1-P | Field mustard | nucleus | 12.36 | 15.87 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EnsemblPlantsGene:Bra029129 | EnsemblPlants:Bra029129.1 | EnsemblPlants:Bra029129.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M4EK12 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF563 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002540076 | SEG:seg | : | : |
Description
AT5G52260 (E=8e-114) AtMYB19 | AtMYB19 (myb domain protein 19); DNA binding / transcription factor
Coordinates
chrA03:-:6492351..6493433
Molecular Weight (calculated)
31000.4 Da
IEP (calculated)
9.027
GRAVY (calculated)
-0.933
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKMTKSGER PKQRQRKGLW SPEEDQKLKS FILSQGHACW TTVPILAGLQ RNGKSCRLRW INYLRPGLKR GTFSAEEEET ILTLHSSLGN KWSRIAKYLP
101: GRTDNEIKNY WHSYLKKGCL KSQPQLKTQR SNLTESSSSP VSCGKRNPET LDHVISFQTL PEKPYSPQSQ GSNKNMMKSN NMPKLFFSEW ITSSDPHVNY
201: SSEFTDSLHI NQTQNRSEDE ELVMIKNSYS SLEDDVMFRT EFQQPHHEYA NYYTSEDFFI NSDVTYM
101: GRTDNEIKNY WHSYLKKGCL KSQPQLKTQR SNLTESSSSP VSCGKRNPET LDHVISFQTL PEKPYSPQSQ GSNKNMMKSN NMPKLFFSEW ITSSDPHVNY
201: SSEFTDSLHI NQTQNRSEDE ELVMIKNSYS SLEDDVMFRT EFQQPHHEYA NYYTSEDFFI NSDVTYM
001: MTKSGERPKQ RQRKGLWSPE EDQKLKSFIL SRGHACWTTV PILAGLQRNG KSCRLRWINY LRPGLKRGSF SEEEEETILT LHSSLGNKWS RIAKYLPGRT
101: DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID
201: YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY ANYYSSGDFF INSDQNYV
101: DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID
201: YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY ANYYSSGDFF INSDQNYV
Arabidopsis Description
AtMYB19MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.