Factsheet for Bra018027.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64708	Canola	nucleus	98.45	98.45
CDY05881	Canola	nucleus	80.23	80.23
AT3G48920.1	Thale cress	nucleus	71.71	70.88
Solyc01g009650.1.1	Tomato	nucleus	21.32	60.44
GSMUA_Achr4P25340_001	Banana	nucleus	27.13	49.3
Bra013900.1-P	Field mustard	nucleus	34.88	41.86
KRH35334	Soybean	nucleus	38.37	36.67
TraesCS2D01G367000.1	Wheat	nucleus	39.53	36.3
TraesCS2B01G387800.1	Wheat	nucleus	39.15	36.2
TraesCS2A01G370700.1	Wheat	nucleus	38.76	36.1
TraesCS2D01G366800.1	Wheat	nucleus	38.37	35.87
TraesCS2B01G387300.1	Wheat	nucleus	37.98	35.77
TraesCS2A01G370300.1	Wheat	nucleus	38.37	35.74
TraesCS2B01G387500.1	Wheat	nucleus	39.15	35.69
PGSC0003DMT400037080	Potato	nucleus	38.37	35.61
Bra029129.1-P	Field mustard	nucleus	36.82	35.58
TraesCS2B01G387700.1	Wheat	nucleus	37.6	35.4
TraesCS2D01G366900.1	Wheat	nucleus	38.76	35.34
Solyc03g025870.2.1	Tomato	nucleus	37.98	35.13
TraesCS2A01G370400.1	Wheat	nucleus	38.37	34.98
KRH09018	Soybean	nucleus	39.15	34.71
Zm00001d017383_P001	Maize	nucleus	39.15	34.71
VIT_16s0050g00050.t01	Wine grape	nucleus	39.53	34.23
Os04t0532800-01	Rice	nucleus	36.05	34.07
TraesCS6A01G236700.1	Wheat	nucleus	37.6	33.8
GSMUA_Achr4P29410_001	Banana	nucleus	36.43	33.69
Zm00001d051267_P001	Maize	nucleus	36.05	33.45
KRH38485	Soybean	nucleus	37.6	33.33
EES11177	Sorghum	nucleus	38.37	33.22
TraesCS6B01G265200.1	Wheat	nucleus	37.98	33.22
GSMUA_Achr4P11960_001	Banana	nucleus	31.4	32.93
TraesCS6D01G219300.1	Wheat	nucleus	37.21	32.54
GSMUA_Achr8P11340_001	Banana	nucleus	34.5	32.01
HORVU6Hr1G060600.2	Barley	mitochondrion	27.52	31.84
EES07547	Sorghum	nucleus	37.21	31.48
HORVU6Hr1G060610.3	Barley	nucleus	37.21	31.17
KRG91494	Soybean	nucleus	39.53	30.63
HORVU2Hr1G091590.1	Barley	nucleus	36.05	30.59
GSMUA_Achr1P17480_001	Banana	nucleus	31.01	29.3
GSMUA_Achr2P11450_001	Banana	nucleus	34.88	29.22
EES06150	Sorghum	nucleus	33.72	29.1
Zm00001d014989_P001	Maize	nucleus	34.11	28.57
GSMUA_Achr4P05410_001	Banana	nucleus	31.78	28.28
TraesCS6D01G043600.1	Wheat	nucleus	33.72	27.53
TraesCS6B01G053100.1	Wheat	nucleus	32.56	27.27
HORVU6Hr1G007010.2	Barley	nucleus	32.95	27.16
Bra006166.1-P	Field mustard	nucleus	29.07	26.79
Bra039339.1-P	Field mustard	nucleus	29.07	25.51
Bra008875.1-P	Field mustard	nucleus	27.52	25.36
TraesCS6A01G037700.1	Wheat	nucleus	33.72	24.51
Bra034738.1-P	Field mustard	nucleus	27.91	24.49
Bra031669.1-P	Field mustard	nucleus	29.84	23.55
Bra020016.1-P	Field mustard	nucleus	30.23	23.49
Bra036317.1-P	Field mustard	nucleus	30.23	23.21
Bra030783.1-P	Field mustard	nucleus	31.01	23.19
Bra036588.1-P	Field mustard	nucleus	29.46	22.69
Bra029696.1-P	Field mustard	nucleus	27.91	21.62
Bra021515.1-P	Field mustard	nucleus	29.46	21.35
Bra019154.1-P	Field mustard	nucleus	37.21	20.82
Bra001284.1-P	Field mustard	nucleus	27.13	20.59
Bra027771.1-P	Field mustard	nucleus	28.68	20.22
Bra027668.1-P	Field mustard	nucleus	28.68	20.05
Bra027389.1-P	Field mustard	nucleus	26.36	19.54
Bra009910.1-P	Field mustard	nucleus	22.87	17.88
Bra020526.1-P	Field mustard	nucleus	28.68	16.82
Bra023380.1-P	Field mustard	nucleus	12.02	14.9

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra018027	EnsemblPlants:Bra018027.1	EnsemblPlants:Bra018027.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008150	GO:GO:0009719	GO:GO:0009751
InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4DNE0	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF563	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000253F295

Description

AT3G48920 (E=3e-103) AtMYB45 | AtMYB45 (myb domain protein 45); DNA binding / transcription factor

Coordinates

chrA06:-:9593180..9594465

Molecular Weight (calculated)

29422.7 Da

IEP (calculated)

8.693

GRAVY (calculated)

-0.616

Length

258 amino acids

Sequence
(BLAST)

001: MVCKSETSNR KLKSKEKQRK GLWSPEEDEK LRSYVLKCGH VCWSTIPIQA GLQRNGKSCR LRWVNYLRPG LKKSAFTKEE ETTLLSLHSI LGNKWAHISK
101: YLPGRTDNEI KNYWHSYLKK SVPSTKHEST RTPQTHSITN SVKTLESTTG RSSSFINVGE SFSAKLSNFS PSVVFSEWLD HSLVMDQLPQ THSYVQDHIV
201: PEERGLAGTF GQRLYENSNS MVDYIPNSDF LLGDEIEFCT SFSDSFLIDA LASEQRSM

Best Arabidopsis Sequence Match ( AT3G48920.1 )
(BLAST)

001: MVFKSEKSNR EMKSKEKQRK GLWSPEEDEK LRSHVLKYGH GCWSTIPLQA GLQRNGKSCR LRWVNYLRPG LKKSLFTKQE ETILLSLHSM LGNKWSQISK
101: FLPGRTDNEI KNYWHSNLKK GVTLKQHETT KKHQTPLITN SLEALQSSTE RSSSSINVGE TSNAQTSSFS PNLVFSEWLD HSLLMDQSPQ KSSYVQNLVL
201: PEERGFIGPC GPRYLGNDSL PDFVPNSEFL LDDEISSEIE FCTSFSDNFL FDGLINELRP M

Arabidopsis Description

AtMYB45MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.