Factsheet for Bra031669.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06359	Canola	nucleus	93.27	99.03
Zm00001d008206_P001	Maize	nucleus	18.96	84.93
Bra020016.1-P	Field mustard	nucleus	56.57	55.72
Bra030783.1-P	Field mustard	nucleus	57.19	54.2
GSMUA_Achr11P...	Banana	nucleus	37.31	52.36
GSMUA_Achr4P19560_001	Banana	nucleus	42.51	49.12
GSMUA_AchrUn_...	Banana	nucleus	40.98	48.73
GSMUA_Achr2P01830_001	Banana	nucleus	43.73	46.58
GSMUA_Achr7P17250_001	Banana	nucleus	47.4	45.19
GSMUA_Achr1P18990_001	Banana	nucleus	45.26	44.31
GSMUA_Achr3P12200_001	Banana	nucleus	47.4	43.06
GSMUA_Achr3P24580_001	Banana	nucleus	45.26	43.02
GSMUA_Achr1P25120_001	Banana	nucleus	46.48	42.22
GSMUA_Achr2P18440_001	Banana	nucleus	46.48	41.64
Zm00001d024784_P001	Maize	nucleus	32.11	41.02
KRH68389	Soybean	nucleus	52.29	40.91
KRG90431	Soybean	nucleus	53.52	40.89
Zm00001d040527_P001	Maize	nucleus	34.86	40.57
KRH33726	Soybean	nucleus	53.21	40.56
GSMUA_Achr8P18730_001	Banana	nucleus	45.87	40.54
KRG96660	Soybean	nucleus	53.52	40.32
Bra036588.1-P	Field mustard	nucleus	40.67	39.7
VIT_14s0060g00240.t01	Wine grape	nucleus	52.91	39.41
Os01t0285300-01	Rice	nucleus	50.76	38.78
GSMUA_Achr5P18400_001	Banana	nucleus	44.04	38.4
GSMUA_Achr11P...	Banana	nucleus	44.04	38.4
GSMUA_Achr2P07930_001	Banana	nucleus	44.34	38.06
Os05t0140100-01	Rice	nucleus	49.54	37.94
OQU77376	Sorghum	nucleus	49.85	37.91
HORVU1Hr1G017970.4	Barley	nucleus	49.54	37.76
TraesCS1D01G084400.1	Wheat	nucleus	49.54	37.76
TraesCS1A01G083100.2	Wheat	nucleus	49.54	37.67
TraesCS1B01G100600.1	Wheat	nucleus	49.54	37.59
Zm00001d010907_P001	Maize	nucleus	48.93	37.56
PGSC0003DMT400047076	Potato	nucleus	48.93	37.56
Bra036317.1-P	Field mustard	nucleus	38.53	37.5
Bra013900.1-P	Field mustard	nucleus	24.46	37.21
Solyc01g102340.2.1	Tomato	nucleus	48.32	37.09
EES02806	Sorghum	nucleus	48.32	37.0
Solyc10g044680.1.1	Tomato	nucleus	43.43	35.68
PGSC0003DMT400040774	Potato	nucleus	44.04	35.38
Bra034738.1-P	Field mustard	nucleus	29.97	33.33
Bra006166.1-P	Field mustard	nucleus	28.44	33.21
Bra008875.1-P	Field mustard	nucleus	28.44	33.21
Bra039339.1-P	Field mustard	nucleus	29.36	32.65
Bra009910.1-P	Field mustard	nucleus	32.11	31.82
Bra029129.1-P	Field mustard	nucleus	24.77	30.34
Bra018027.1-P	Field mustard	nucleus	23.55	29.84
Bra020526.1-P	Field mustard	nucleus	40.06	29.77
Bra029696.1-P	Field mustard	nucleus	29.97	29.43
Bra021515.1-P	Field mustard	nucleus	30.58	28.09
Bra001284.1-P	Field mustard	nucleus	28.75	27.65
Bra027771.1-P	Field mustard	nucleus	29.97	26.78
Bra027668.1-P	Field mustard	nucleus	29.66	26.29
Bra027389.1-P	Field mustard	nucleus	26.3	24.71
Bra023380.1-P	Field mustard	nucleus	12.84	20.19
Bra019154.1-P	Field mustard	nucleus	24.77	17.57

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra031669	EnsemblPlants:Bra031669.1	EnsemblPlants:Bra031669.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733
GO:GO:0009739	GO:GO:0009751	GO:GO:0009753	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4ES91
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF465	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002543289	SEG:seg	:	:

Description

AT1G57560 (E=7e-092) AtMYB50 | AtMYB50 (myb domain protein 50); DNA binding / transcription factor

Coordinates

chrA09:-:35307880..35309062

Molecular Weight (calculated)

36691.6 Da

IEP (calculated)

7.153

GRAVY (calculated)

-0.665

Length

327 amino acids

Sequence
(BLAST)

001: MRHSCCYKQK LRKGLWSPDE DEKLLNHITH HGHGCWSSVP KHAGLQRCGK SCRLRWINYL RPDLKRGAFS QDEENLIVEL HAVLGNRWSQ IAAKLPGRTD
101: NEIKNLWNSN IKKKLKQRGI DPNTHKPISE VDRDKPTTSS NDHMSLSSSS ATNQDFFHVR PSDFSDYFNA NLGLSVESSL CSMVPVQFST GNMDGSVFQT
201: HSCVKPSISF PPDNSSSTDH AAPNWEFQTN NTSSFTDNGG FTWSVPNLSP SLVKPNHNFE ELKWSEYLNT PISLPVFVKS EADYLANVSS LADPWSQSQN
301: ESLSTPEASD VFCKDLQRTA VSFGQSL

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.