Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22635 | Canola | nucleus | 94.48 | 94.17 |
| Bra031669.1-P | Field mustard | nucleus | 99.03 | 93.27 |
| Zm00001d008206_P001 | Maize | nucleus | 20.13 | 84.93 |
| CDY05516 | Canola | nucleus | 35.39 | 82.58 |
| CDY05331 | Canola | nucleus | 35.06 | 81.82 |
| CDX93504 | Canola | nucleus | 54.55 | 57.14 |
| CDY50901 | Canola | nucleus | 53.25 | 54.85 |
| CDY32188 | Canola | nucleus | 58.44 | 53.57 |
| GSMUA_Achr11P... | Banana | nucleus | 39.94 | 52.79 |
| CDY31082 | Canola | nucleus | 59.09 | 52.6 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 43.83 | 47.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.53 | 47.64 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 45.13 | 45.28 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 48.38 | 43.44 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 46.43 | 42.81 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 48.7 | 41.67 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 47.73 | 40.83 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 48.38 | 40.82 |
| KRH68389 | Soybean | nucleus | 54.87 | 40.43 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 45.13 | 40.41 |
| KRH33726 | Soybean | nucleus | 55.19 | 39.63 |
| KRG90431 | Soybean | nucleus | 54.87 | 39.49 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 47.4 | 39.46 |
| KRG96660 | Soybean | nucleus | 55.52 | 39.4 |
| Zm00001d040527_P001 | Maize | nucleus | 35.39 | 38.79 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 55.19 | 38.72 |
| Zm00001d024784_P001 | Maize | nucleus | 32.14 | 38.67 |
| CDY68301 | Canola | nucleus | 41.23 | 37.91 |
| CDX87038 | Canola | nucleus | 41.56 | 37.87 |
| Os01t0285300-01 | Rice | nucleus | 52.27 | 37.62 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 45.78 | 37.6 |
| GSMUA_Achr11P... | Banana | nucleus | 45.45 | 37.33 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 46.1 | 37.27 |
| Os05t0140100-01 | Rice | nucleus | 51.3 | 37.0 |
| OQU77376 | Sorghum | nucleus | 50.97 | 36.51 |
| Zm00001d010907_P001 | Maize | nucleus | 50.32 | 36.38 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 50.65 | 36.36 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 50.65 | 36.36 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 50.65 | 36.28 |
| CDX88230 | Canola | nucleus | 41.88 | 36.24 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 50.65 | 36.19 |
| PGSC0003DMT400047076 | Potato | nucleus | 50.0 | 36.15 |
| CDX80576 | Canola | nucleus | 41.88 | 36.13 |
| CDY58217 | Canola | nucleus | 39.29 | 36.01 |
| CDY07124 | Canola | nucleus | 39.29 | 36.01 |
| EES02806 | Sorghum | nucleus | 49.68 | 35.83 |
| Solyc01g102340.2.1 | Tomato | nucleus | 49.35 | 35.68 |
| Solyc10g044680.1.1 | Tomato | nucleus | 44.48 | 34.42 |
| PGSC0003DMT400040774 | Potato | nucleus | 45.13 | 34.15 |
| CDY08409 | Canola | nucleus | 31.49 | 32.99 |
| CDY42171 | Canola | nucleus | 31.49 | 32.99 |
| CDY42172 | Canola | nucleus | 31.49 | 32.99 |
| CDX78493 | Canola | nucleus | 29.87 | 32.86 |
| CDY53970 | Canola | nucleus | 29.87 | 32.86 |
| CDX91158 | Canola | nucleus | 29.55 | 32.73 |
| CDX85684 | Canola | nucleus | 29.55 | 32.62 |
| CDY43404 | Canola | nucleus | 30.84 | 32.31 |
| CDX94440 | Canola | nucleus | 26.3 | 31.52 |
| CDY50197 | Canola | nucleus | 25.32 | 31.2 |
| CDX89413 | Canola | nucleus | 27.27 | 31.11 |
| CDY32589 | Canola | nucleus | 25.32 | 31.08 |
| CDX92718 | Canola | nucleus | 25.97 | 30.53 |
| CDY38910 | Canola | nucleus | 26.3 | 30.34 |
| CDY64708 | Canola | nucleus | 25.0 | 29.84 |
| CDY05881 | Canola | nucleus | 24.35 | 29.07 |
| CDY27999 | Canola | nucleus | 31.49 | 28.96 |
| CDY35982 | Canola | nucleus | 31.17 | 28.66 |
| CDY55231 | Canola | nucleus | 29.55 | 27.74 |
| CDY37496 | Canola | nucleus | 32.14 | 27.73 |
| CDY39077 | Canola | nucleus | 32.14 | 27.73 |
| CDX74013 | Canola | nucleus | 29.87 | 27.06 |
| CDY70536 | Canola | nucleus | 29.87 | 26.82 |
| CDY25547 | Canola | nucleus | 31.82 | 26.49 |
| CDY08343 | Canola | nucleus | 31.49 | 26.29 |
| CDY38211 | Canola | nucleus | 31.49 | 26.29 |
| CDX97209 | Canola | nucleus | 29.22 | 25.42 |
| CDX97526 | Canola | nucleus | 27.6 | 25.07 |
| CDY34386 | Canola | extracellular | 12.99 | 13.33 |
| CDY05517 | Canola | plastid | 4.22 | 7.6 |
| CDY70493 | Canola | cytosol, plastid | 2.92 | 6.82 |
| CDY70602 | Canola | nucleus, plastid | 2.92 | 5.77 |
Protein Annotations
| EnsemblPlants:CDY06359 | EnsemblPlantsGene:GSBRNA2T00122295001 | Gene3D:1.10.10.60 | GO:A0A078F0I4 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF465 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY06359 | ProteinID:CDY06359.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF0976 | MapMan:15.5.2.1 | : |
Description
BnaA09g48440D
Coordinates
chrLK031968:+:970037..971648
Molecular Weight (calculated)
34725.4 Da
IEP (calculated)
7.588
GRAVY (calculated)
-0.698
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHSCCYKQK LRKGLWSPDE DEKLLKHITH HGHGCWSSVP KHAGLQRCGK SCRLRWINYL RPDLKRGAFS QEEENLIVEL HAVLGNRWSQ IAAKLPGRTD
101: NEIKNLWNSN IKKKLKQRGI DPNTHKPISE VDRDKPTTSS NDHMSLSSSS ATNQDFFHVR PSDFSDYFNA NLGLSVESSL CSMVPVQFST GNMDGSVFQT
201: HSCVKPSISF PPDNSSSTDH AAPNWEFQTN NTSIKPNHNF EELKWSEYLN TPISLPVFVK SEADYLANVS SLADPWSQSQ NESLSTPEAS DVFCKDLQRT
301: AVSFGQSL
101: NEIKNLWNSN IKKKLKQRGI DPNTHKPISE VDRDKPTTSS NDHMSLSSSS ATNQDFFHVR PSDFSDYFNA NLGLSVESSL CSMVPVQFST GNMDGSVFQT
201: HSCVKPSISF PPDNSSSTDH AAPNWEFQTN NTSIKPNHNF EELKWSEYLN TPISLPVFVK SEADYLANVS SLADPWSQSQ NESLSTPEAS DVFCKDLQRT
301: AVSFGQSL
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.