Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036317.1-P | Field mustard | nucleus | 98.51 | 98.51 |
| CDY58217 | Canola | nucleus | 98.51 | 98.51 |
| CDY05331 | Canola | nucleus | 33.93 | 86.36 |
| CDY05516 | Canola | nucleus | 33.63 | 85.61 |
| AT4G01680.2 | Thale cress | nucleus | 88.39 | 85.34 |
| GSMUA_Achr11P... | Banana | nucleus | 33.63 | 48.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.42 | 43.27 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 36.31 | 43.11 |
| CDX93504 | Canola | nucleus | 37.5 | 42.86 |
| CDY50901 | Canola | nucleus | 37.8 | 42.47 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 36.9 | 40.39 |
| CDY22635 | Canola | nucleus | 36.9 | 40.13 |
| CDY32188 | Canola | nucleus | 39.58 | 39.58 |
| CDY06359 | Canola | nucleus | 36.01 | 39.29 |
| CDY31082 | Canola | nucleus | 39.58 | 38.44 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 37.8 | 36.92 |
| CDY68301 | Canola | nucleus | 36.61 | 36.72 |
| CDX87038 | Canola | nucleus | 36.9 | 36.69 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 36.01 | 36.23 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 38.69 | 36.11 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 38.99 | 35.89 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 36.01 | 35.28 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 38.99 | 34.93 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 36.9 | 34.44 |
| CDX88230 | Canola | nucleus | 36.31 | 34.27 |
| CDX80576 | Canola | nucleus | 36.31 | 34.17 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 37.2 | 33.78 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 37.5 | 33.07 |
| CDY42172 | Canola | nucleus | 28.87 | 32.99 |
| CDY42171 | Canola | nucleus | 28.87 | 32.99 |
| CDY08409 | Canola | nucleus | 28.87 | 32.99 |
| PGSC0003DMT400040774 | Potato | nucleus | 39.88 | 32.92 |
| CDY43404 | Canola | nucleus | 28.57 | 32.65 |
| KRH68350 | Soybean | nucleus | 40.48 | 32.54 |
| Solyc10g044680.1.1 | Tomato | nucleus | 38.39 | 32.41 |
| CDY32589 | Canola | nucleus | 24.11 | 32.27 |
| GSMUA_Achr11P... | Banana | nucleus | 35.42 | 31.73 |
| Solyc01g102340.2.1 | Tomato | nucleus | 40.18 | 31.69 |
| KRH69136 | Soybean | nucleus | 40.77 | 31.57 |
| PGSC0003DMT400047076 | Potato | nucleus | 39.88 | 31.46 |
| VIT_07s0005g02480.t01 | Wine grape | nucleus | 41.96 | 31.26 |
| CDY50197 | Canola | nucleus | 23.21 | 31.2 |
| CDY05881 | Canola | nucleus | 23.81 | 31.01 |
| CDY64708 | Canola | nucleus | 23.81 | 31.01 |
| CDY38910 | Canola | nucleus | 24.4 | 30.71 |
| KRH33667 | Soybean | nucleus | 41.67 | 30.7 |
| CDX91158 | Canola | nucleus | 25.3 | 30.58 |
| CDX85684 | Canola | nucleus | 25.3 | 30.47 |
| CDY53970 | Canola | nucleus | 25.3 | 30.36 |
| CDX94440 | Canola | nucleus | 23.21 | 30.35 |
| CDX78493 | Canola | nucleus | 25.0 | 30.0 |
| CDY55231 | Canola | nucleus | 28.87 | 29.57 |
| CDY39077 | Canola | nucleus | 31.25 | 29.41 |
| CDY37496 | Canola | nucleus | 31.25 | 29.41 |
| CDX92718 | Canola | nucleus | 22.92 | 29.39 |
| CDX89413 | Canola | nucleus | 23.21 | 28.89 |
| CDX97526 | Canola | nucleus | 28.87 | 28.61 |
| KRG96619 | Soybean | plastid, vacuole | 40.18 | 27.27 |
| CDY38211 | Canola | nucleus | 29.76 | 27.1 |
| CDY27999 | Canola | nucleus | 26.79 | 26.87 |
| CDY08343 | Canola | nucleus | 29.46 | 26.83 |
| CDY35982 | Canola | nucleus | 26.49 | 26.57 |
| CDY25547 | Canola | nucleus | 29.17 | 26.49 |
| CDX74013 | Canola | nucleus | 25.89 | 25.59 |
| CDY70536 | Canola | nucleus | 25.6 | 25.07 |
| CDX97209 | Canola | nucleus | 25.3 | 24.01 |
| CDY34386 | Canola | extracellular | 10.42 | 11.67 |
| CDY05517 | Canola | plastid | 2.68 | 5.26 |
| CDY70602 | Canola | nucleus, plastid | 2.08 | 4.49 |
| CDY70493 | Canola | cytosol, plastid | 1.49 | 3.79 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078F2H7 | EnsemblPlants:CDY07124 | ProteinID:CDY07124 | ProteinID:CDY07124.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00123472001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF465 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EB5914 | SEG:seg | : |
Description
BnaCnng01390D
Coordinates
chrLK031975:+:359447..360799
Molecular Weight (calculated)
37673.9 Da
IEP (calculated)
7.341
GRAVY (calculated)
-0.689
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLRYIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEENLIIE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS SLKKKLRLRG IDPVTHKLLA EIETGTDDNT TPVEKCQTTY LIETEGSSST TTGSTNHNNS NTDHLYTGNF GFQRLSLETG SRIQTGIWIP
201: QTGRNHHVDT VPSAVVLPGS MFSSGLTDST TGYRSSNLGL TELDNSFSTG PMITEQHLQE SNYNNSTFFG TGNLSWGLTM EENQFTISNN SLQNHSNSSL
301: YSEIKSETNF FGTEAANVGM WPCNQLQPQQ HAYGHI
101: DNEIKNLWNS SLKKKLRLRG IDPVTHKLLA EIETGTDDNT TPVEKCQTTY LIETEGSSST TTGSTNHNNS NTDHLYTGNF GFQRLSLETG SRIQTGIWIP
201: QTGRNHHVDT VPSAVVLPGS MFSSGLTDST TGYRSSNLGL TELDNSFSTG PMITEQHLQE SNYNNSTFFG TGNLSWGLTM EENQFTISNN SLQNHSNSSL
301: YSEIKSETNF FGTEAANVGM WPCNQLQPQQ HAYGHI
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLRYIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEENLIIE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRLRG IDPVTHKLLT EIETGTDDKT KPVEKSQQTY LVETDGSSST TTCSTNQNNN TDHLYTGNFG FQRLSLENGS RIAAGSDLGI
201: WIPQTGRNHH HHVDETIPSA VVLPGSMFSS GLTGYRSSNL GLIELENSFS TGPMMTEHQQ IQESNYNNST FFGNGNLNWG LTMEENQNPF TISNHSNSSL
301: YSDIKSETNF FGTEATNVGM WPCNQLQPQQ HAYGHI
101: DNEIKNLWNS CLKKKLRLRG IDPVTHKLLT EIETGTDDKT KPVEKSQQTY LVETDGSSST TTCSTNQNNN TDHLYTGNFG FQRLSLENGS RIAAGSDLGI
201: WIPQTGRNHH HHVDETIPSA VVLPGSMFSS GLTGYRSSNL GLIELENSFS TGPMMTEHQQ IQESNYNNST FFGNGNLNWG LTMEENQNPF TISNHSNSSL
301: YSDIKSETNF FGTEATNVGM WPCNQLQPQQ HAYGHI
Arabidopsis Description
MYB55Myb domain protein 55 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.