Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027389.1-P | Field mustard | nucleus | 99.7 | 97.13 |
| CDY55231 | Canola | nucleus | 80.24 | 82.93 |
| CDY37496 | Canola | nucleus | 82.3 | 78.15 |
| CDY39077 | Canola | nucleus | 82.3 | 78.15 |
| AT3G13890.1 | Thale cress | nucleus | 83.78 | 77.38 |
| CDY05516 | Canola | nucleus | 25.07 | 64.39 |
| CDY05331 | Canola | nucleus | 25.07 | 64.39 |
| PGSC0003DMT400087467 | Potato | nucleus | 37.17 | 45.82 |
| VIT_09s0002g01670.t01 | Wine grape | nucleus | 40.41 | 44.34 |
| KRH47101 | Soybean | nucleus | 45.43 | 43.75 |
| KRH44125 | Soybean | nucleus | 44.84 | 43.55 |
| KRH10036 | Soybean | nucleus | 44.84 | 43.06 |
| Solyc03g121740.1.1 | Tomato | nucleus | 42.18 | 39.18 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 33.33 | 37.79 |
| HORVU3Hr1G066860.11 | Barley | nucleus | 29.5 | 34.01 |
| TraesCS3D01G251600.1 | Wheat | nucleus | 29.2 | 33.79 |
| TraesCS3A01G251200.1 | Wheat | nucleus | 29.2 | 33.79 |
| CDY43404 | Canola | nucleus | 29.2 | 33.67 |
| Os01t0709000-01 | Rice | nucleus | 30.09 | 33.22 |
| CDY08409 | Canola | nucleus | 28.32 | 32.65 |
| CDY42172 | Canola | nucleus | 28.32 | 32.65 |
| CDY42171 | Canola | nucleus | 28.32 | 32.65 |
| EES03504 | Sorghum | nucleus | 29.79 | 31.66 |
| CDX93504 | Canola | nucleus | 27.43 | 31.63 |
| TraesCS3B01G280700.1 | Wheat | nucleus | 26.55 | 31.47 |
| CDY50901 | Canola | nucleus | 27.43 | 31.1 |
| CDX91158 | Canola | nucleus | 24.19 | 29.5 |
| CDX85684 | Canola | nucleus | 24.19 | 29.39 |
| CDY53970 | Canola | nucleus | 24.19 | 29.29 |
| CDY58217 | Canola | nucleus | 28.61 | 28.87 |
| CDY07124 | Canola | nucleus | 28.61 | 28.87 |
| CDY32188 | Canola | nucleus | 28.32 | 28.57 |
| CDY22635 | Canola | nucleus | 25.96 | 28.48 |
| CDX78493 | Canola | nucleus | 23.3 | 28.21 |
| CDY31082 | Canola | nucleus | 28.61 | 28.03 |
| CDY68301 | Canola | nucleus | 27.43 | 27.76 |
| CDY50197 | Canola | nucleus | 20.35 | 27.6 |
| CDY06359 | Canola | nucleus | 25.07 | 27.6 |
| CDY32589 | Canola | nucleus | 20.35 | 27.49 |
| CDX87038 | Canola | nucleus | 27.14 | 27.22 |
| CDY38211 | Canola | nucleus | 29.5 | 27.1 |
| CDY08343 | Canola | nucleus | 29.5 | 27.1 |
| CDY64708 | Canola | nucleus | 20.35 | 26.74 |
| CDY25547 | Canola | nucleus | 28.91 | 26.49 |
| CDY05881 | Canola | nucleus | 20.06 | 26.36 |
| CDX94440 | Canola | nucleus | 19.76 | 26.07 |
| CDX92718 | Canola | nucleus | 20.06 | 25.95 |
| CDX89413 | Canola | nucleus | 20.65 | 25.93 |
| CDY38910 | Canola | nucleus | 20.35 | 25.84 |
| CDY27999 | Canola | nucleus | 25.37 | 25.67 |
| CDY35982 | Canola | nucleus | 25.07 | 25.37 |
| CDX88230 | Canola | nucleus | 26.55 | 25.28 |
| CDX80576 | Canola | nucleus | 26.55 | 25.21 |
| CDX74013 | Canola | nucleus | 23.89 | 23.82 |
| CDX97209 | Canola | nucleus | 24.19 | 23.16 |
| CDY70536 | Canola | nucleus | 23.01 | 22.74 |
| CDY34386 | Canola | extracellular | 11.8 | 13.33 |
| CDY70602 | Canola | nucleus, plastid | 4.13 | 8.97 |
| CDY70493 | Canola | cytosol, plastid | 2.36 | 6.06 |
| CDY05517 | Canola | plastid | 0.88 | 1.75 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078E8M9 | EnsemblPlants:CDX97526 | ProteinID:CDX97526 | ProteinID:CDX97526.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00104734001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF901 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEB6C4 | SEG:seg | : |
Description
BnaA05g25530D
Coordinates
chrLK031900:-:124728..126097
Molecular Weight (calculated)
38259.0 Da
IEP (calculated)
7.408
GRAVY (calculated)
-0.575
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN TYGHGCLQRC GKSCRLRWIN YLRPDLKRGS FSSQEAALII ELHSLLGNRW AQIAKHLPGR TDNEVKNFWN
101: SSIKKKLMSH HHHGHHYHIS SMASLLTNLP YHNGFNSTNG GDEGSRFMSN IIITNTNPNF ITPSHLSLPS PHVMTPLMFS TSREGDFKFP TTTNTNQSHQ
201: DHNNLYNNLD ILSATPIINS HHHHYDNDSQ LPSLPDLPAS TICTYQETLQ DCDDGNEVFV TPYNSNVATK LLCEQVLEEK ILSSSPITQD HGLLIPTKYN
301: LQMPGDHHNR VVSYINHMII PSSSSSSPSP ISCGQYVIT
101: SSIKKKLMSH HHHGHHYHIS SMASLLTNLP YHNGFNSTNG GDEGSRFMSN IIITNTNPNF ITPSHLSLPS PHVMTPLMFS TSREGDFKFP TTTNTNQSHQ
201: DHNNLYNNLD ILSATPIINS HHHHYDNDSQ LPSLPDLPAS TICTYQETLQ DCDDGNEVFV TPYNSNVATK LLCEQVLEEK ILSSSPITQD HGLLIPTKYN
301: LQMPGDHHNR VVSYINHMII PSSSSSSPSP ISCGQYVIT
001: MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGLQRCG KSCRLRWINY LRPDLKRGSF SPQEAALIIE LHSILGNRWA QIAKHLPGRT
101: DNEVKNFWNS SIKKKLMSHH HHGHHHHHLS SMASLLTNLP YHNGFNPTTV DDESSRFMSN IITNTNPNFI TPSHLSLPSP HVMTPLMFPT SREGDFKFLT
201: TNNPNQSHHH DNNHYNNLDI LSPTPTINNH HQPSLSSCPH DNNLQWPALP DFPASTISGF QETLQDYDDA NKLNVFVTPF NDNAKKLLCG EVLEGKVLSS
301: SSPISQDHGL FLPTTYNFQM TSTSDHQHHH RVDSYINHMI IPSSSSSSPI SCGQYVIT
101: DNEVKNFWNS SIKKKLMSHH HHGHHHHHLS SMASLLTNLP YHNGFNPTTV DDESSRFMSN IITNTNPNFI TPSHLSLPSP HVMTPLMFPT SREGDFKFLT
201: TNNPNQSHHH DNNHYNNLDI LSPTPTINNH HQPSLSSCPH DNNLQWPALP DFPASTISGF QETLQDYDDA NKLNVFVTPF NDNAKKLLCG EVLEGKVLSS
301: SSPISQDHGL FLPTTYNFQM TSTSDHQHHH RVDSYINHMI IPSSSSSSPI SCGQYVIT
Arabidopsis Description
MYB26Transcription factor MYB26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.