Factsheet for HORVU3Hr1G066860.11

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G251600.1	Wheat	nucleus	91.84	92.15
TraesCS3A01G251200.1	Wheat	nucleus	91.5	91.81
TraesCS3B01G280700.1	Wheat	nucleus	87.76	90.21
Os01t0709000-01	Rice	nucleus	80.95	77.52
EES03504	Sorghum	nucleus	77.55	71.47
PGSC0003DMT400087467	Potato	nucleus	35.71	38.18
GSMUA_Achr6P35800_001	Banana	nucleus	37.07	36.45
VIT_09s0002g01670.t01	Wine grape	nucleus	37.41	35.6
KRH44125	Soybean	nucleus	38.78	32.66
KRH47101	Soybean	nucleus	38.78	32.39
HORVU3Hr1G047290.2	Barley	nucleus	32.65	31.68
KRH10036	Soybean	nucleus	37.41	31.16
CDY55231	Canola	nucleus	34.69	31.1
HORVU6Hr1G060600.2	Barley	mitochondrion	23.47	30.94
Bra021515.1-P	Field mustard	nucleus	36.39	30.06
CDY39077	Canola	nucleus	36.39	29.97
CDY37496	Canola	nucleus	36.39	29.97
CDX97526	Canola	nucleus	34.01	29.5
HORVU7Hr1G072450.2	Barley	nucleus	34.01	29.33
AT3G13890.1	Thale cress	nucleus	36.39	29.16
HORVU1Hr1G017970.4	Barley	nucleus	42.52	29.14
Solyc03g121740.1.1	Tomato	nucleus	36.05	29.04
HORVU1Hr1G079040.4	Barley	nucleus, plastid	34.69	28.98
HORVU6Hr1G060610.3	Barley	nucleus	30.27	28.9
Bra027389.1-P	Field mustard	nucleus	34.01	28.74
HORVU2Hr1G091590.1	Barley	nucleus	29.25	28.29
HORVU2Hr1G051030.3	Barley	nucleus	36.05	27.75
HORVU2Hr1G051010.1	Barley	nucleus, plasma membrane	35.71	27.49
HORVU7Hr1G082020.1	Barley	nucleus	32.65	27.43
HORVU6Hr1G007010.2	Barley	nucleus	28.91	27.16
HORVU3Hr1G016940.1	Barley	nucleus	25.85	26.57
HORVU5Hr1G027750.1	Barley	nucleus	30.61	19.4
HORVU1Hr1G079030.2	Barley	nucleus	24.83	15.4

Protein Annotations

EnsemblPlants:HORVU3Hr1G066860.11	EnsemblPlantsGene:HORVU3Hr1G066860	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF656	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000B481679	UniProt:A0A287LFS8	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:507929813..507931534

Molecular Weight (calculated)

31466.1 Da

IEP (calculated)

7.501

GRAVY (calculated)

-0.222

Length

294 amino acids

Sequence
(BLAST)

001: MGHHSCCNKQ KVRRGLWSPE EDEKLVKYIT AHGHGCWSSV PRQAGLQRCG KSCRLRWINY LRPDLKRGSF SQEEEALIVE LHRVLGNRWW AQIAKHLPGR
101: TDNEVKNFWN STIKKKLISQ AVGSLHSGNI PSSADLYYNI LDGAGQGIAA AGCASLSVLD NAAQAVATQC PPSSVHNSAA WLGFASQPLL LPVHGGDLQY
201: AVDGEFIRLC RAADNAYPDN GGPNLLAQEG AADRSCLPAF AEPKGAGAFA ADPGMGPVVD FMDAILGSSS TSAASISSVD SFSANTGMQL HWVP

Best Arabidopsis Sequence Match ( AT3G12720.1 )
(BLAST)

001: MREKWEMKRD EMGHRCCGKH KVKRGLWSPE EDEKLLRYIT THGHPSWSSV PKLAGLQRCG KSCRLRWINY LRPDLRRGSF NEEEEQIIID VHRILGNKWA
101: QIAKHLPGRT DNEVKNFWNS CIKKKLLSQG LDPSTHNLMP SHKRSSSSNN NNIPKPNKTT SIMKNPTDLD QSTTAFSITN INPPTSTKPN KLKSPNQTTI
201: PSQTVIPIND NMSSTQTMIP INDPMSSLLD DENMIPHWSD VDGMAIHEAP MLPSDKAVVG VDDDDLNMDI LFNTPSSSAF DPDFASIFSS AMSIDFNPMD
301: DLGSWTF

Arabidopsis Description

ATY53AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.