Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- vacuole 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G113300.1 | Wheat | nucleus | 79.53 | 94.86 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 79.09 | 94.34 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 78.02 | 92.82 |
| Zm00001d023931_P001 | Maize | nucleus | 18.75 | 89.69 |
| EES17106 | Sorghum | nucleus | 54.09 | 60.05 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 32.33 | 53.76 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 32.33 | 50.51 |
| PGSC0003DMT400018995 | Potato | nucleus | 38.15 | 50.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.6 | 50.18 |
| VIT_06s0004g02110.t01 | Wine grape | nucleus | 34.91 | 49.85 |
| Solyc11g065840.1.1 | Tomato | nucleus | 37.72 | 49.58 |
| KRH24713 | Soybean | nucleus | 34.27 | 47.32 |
| KRH29717 | Soybean | nucleus | 34.27 | 46.76 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 28.02 | 44.98 |
| KRH10204 | Soybean | nucleus | 31.9 | 44.31 |
| KRH27485 | Soybean | nucleus | 29.96 | 44.13 |
| KRH23131 | Soybean | nucleus | 31.25 | 43.81 |
| KRG93751 | Soybean | nucleus | 31.68 | 43.75 |
| KRH20828 | Soybean | nucleus | 29.31 | 43.73 |
| CDY53970 | Canola | nucleus | 26.08 | 43.21 |
| Bra008875.1-P | Field mustard | nucleus | 26.08 | 43.21 |
| KRH18309 | Soybean | nucleus | 31.47 | 42.82 |
| CDX85684 | Canola | nucleus | 25.65 | 42.65 |
| CDX78493 | Canola | nucleus | 25.65 | 42.5 |
| AT5G12870.1 | Thale cress | nucleus | 25.65 | 42.5 |
| CDX91158 | Canola | nucleus | 25.43 | 42.45 |
| Bra006166.1-P | Field mustard | nucleus | 25.43 | 42.14 |
| PGSC0003DMT400017709 | Potato | nucleus | 31.03 | 40.56 |
| Solyc01g087130.2.1 | Tomato | nucleus | 30.6 | 40.34 |
| CDX97209 | Canola | nucleus | 25.86 | 33.9 |
| HORVU3Hr1G047290.2 | Barley | nucleus | 20.04 | 30.69 |
| HORVU3Hr1G066860.11 | Barley | nucleus | 19.4 | 30.61 |
| Bra023380.1-P | Field mustard | nucleus | 13.58 | 30.29 |
| HORVU6Hr1G060600.2 | Barley | mitochondrion | 13.79 | 28.7 |
| HORVU1Hr1G079040.4 | Barley | nucleus, plastid | 20.91 | 27.56 |
| HORVU3Hr1G016940.1 | Barley | nucleus | 16.59 | 26.92 |
| HORVU6Hr1G007010.2 | Barley | nucleus | 17.67 | 26.2 |
| HORVU6Hr1G060610.3 | Barley | nucleus | 17.24 | 25.97 |
| HORVU2Hr1G091590.1 | Barley | nucleus | 16.81 | 25.66 |
| HORVU7Hr1G072450.2 | Barley | nucleus | 18.75 | 25.51 |
| HORVU7Hr1G082020.1 | Barley | nucleus | 18.75 | 24.86 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 22.41 | 24.24 |
| HORVU2Hr1G051030.3 | Barley | nucleus | 18.97 | 23.04 |
| HORVU2Hr1G051010.1 | Barley | nucleus, plasma membrane | 18.53 | 22.51 |
| HORVU1Hr1G079030.2 | Barley | nucleus | 15.73 | 15.4 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A287QRC9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | EnsemblPlantsGene:HORVU5Hr1G027750 | EnsemblPlants:HORVU5Hr1G027750.1 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF577 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000B4681D5 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:159226619..159229461
Molecular Weight (calculated)
50935.1 Da
IEP (calculated)
7.593
GRAVY (calculated)
-0.423
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: HLLPPLVLLY SCPHSTQKHI HIIYITHTLE SISPLYIYTH IYIHLVYLQP WRSTWSLDRI ASTVHNYIFA RRSGWAMRKP VECPATKCSG GVAPGNSNVA
101: AAAAKLRKGL WSPEEDERLV AYMLRSGQGS WSDVARNAGL QRCGKSCRLR WINYLRPDLK RGAFSPHEED LIVNLHAILG NRWSQIAARL PGRTDNEIKN
201: FWNSTIKKRL KMNSAASSPA TTECASPPEP NLDGGSASCL DLTSQEDGSH HAMKSMWMDS SSSSSSSSSM QQGSRPSTMA PAANRGYGGL LLPLPDQVCG
301: VAPSTHTSLP PFFQDHSSFK QVSPLRTGGY YPHGMAMEGA GGCFMGEEAV GGGGERSVVF NVPPLLEPMA VALQDQTLMA STGNSNNNHR NTNSTAEGTT
401: LSSKNGCNIN DDNTSKNNIN SVVSYWEQHG QQQHMSRNVV MGEWDLEELM KDVSCLPFLD FQVE
101: AAAAKLRKGL WSPEEDERLV AYMLRSGQGS WSDVARNAGL QRCGKSCRLR WINYLRPDLK RGAFSPHEED LIVNLHAILG NRWSQIAARL PGRTDNEIKN
201: FWNSTIKKRL KMNSAASSPA TTECASPPEP NLDGGSASCL DLTSQEDGSH HAMKSMWMDS SSSSSSSSSM QQGSRPSTMA PAANRGYGGL LLPLPDQVCG
301: VAPSTHTSLP PFFQDHSSFK QVSPLRTGGY YPHGMAMEGA GGCFMGEEAV GGGGERSVVF NVPPLLEPMA VALQDQTLMA STGNSNNNHR NTNSTAEGTT
401: LSSKNGCNIN DDNTSKNNIN SVVSYWEQHG QQQHMSRNVV MGEWDLEELM KDVSCLPFLD FQVE
001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
Arabidopsis Description
MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.