Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023931_P001 | Maize | nucleus | 22.73 | 97.94 |
| TraesCS5D01G113300.1 | Wheat | nucleus | 61.48 | 66.07 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 61.48 | 66.07 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 60.77 | 65.13 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 36.12 | 54.12 |
| HORVU5Hr1G027750.1 | Barley | nucleus | 60.05 | 54.09 |
| VIT_06s0004g02110.t01 | Wine grape | nucleus | 40.19 | 51.69 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 35.65 | 50.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.49 | 49.47 |
| PGSC0003DMT400018995 | Potato | nucleus | 39.0 | 46.44 |
| KRH29717 | Soybean | nucleus | 37.56 | 46.18 |
| Solyc11g065840.1.1 | Tomato | nucleus | 39.0 | 46.18 |
| KRH24713 | Soybean | nucleus | 37.08 | 46.13 |
| KRH23131 | Soybean | nucleus | 35.89 | 45.32 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 30.86 | 44.64 |
| KRH10204 | Soybean | nucleus | 35.65 | 44.61 |
| CDX85684 | Canola | nucleus | 29.67 | 44.44 |
| KRG93751 | Soybean | nucleus | 35.65 | 44.35 |
| CDX78493 | Canola | nucleus | 29.67 | 44.29 |
| CDX91158 | Canola | nucleus | 29.43 | 44.24 |
| KRH27485 | Soybean | nucleus | 33.25 | 44.13 |
| Bra006166.1-P | Field mustard | nucleus | 29.43 | 43.93 |
| KRH20828 | Soybean | nucleus | 32.54 | 43.73 |
| AT5G12870.1 | Thale cress | nucleus | 28.95 | 43.21 |
| CDY53970 | Canola | nucleus | 28.95 | 43.21 |
| Bra008875.1-P | Field mustard | nucleus | 28.95 | 43.21 |
| KRH18309 | Soybean | nucleus | 34.45 | 42.23 |
| Solyc01g087130.2.1 | Tomato | nucleus | 34.93 | 41.48 |
| PGSC0003DMT400017709 | Potato | nucleus | 35.17 | 41.41 |
| CDX97209 | Canola | nucleus | 28.71 | 33.9 |
| EES18602 | Sorghum | nucleus | 25.36 | 32.92 |
| EES03490 | Sorghum | nucleus | 24.64 | 32.8 |
| Bra023380.1-P | Field mustard | nucleus | 15.79 | 31.73 |
| EES07893 | Sorghum | nucleus | 19.14 | 31.62 |
| OQU86237 | Sorghum | nucleus | 19.62 | 30.48 |
| EES02393 | Sorghum | nucleus | 20.1 | 30.0 |
| EES11177 | Sorghum | nucleus | 21.05 | 29.53 |
| EES03100 | Sorghum | nucleus | 23.68 | 29.03 |
| EER92216 | Sorghum | nucleus | 22.73 | 28.79 |
| EES03504 | Sorghum | nucleus | 21.77 | 28.53 |
| EES06150 | Sorghum | nucleus | 20.33 | 28.43 |
| EES07547 | Sorghum | nucleus | 19.14 | 26.23 |
| EES02806 | Sorghum | nucleus | 25.84 | 25.29 |
| OQU77376 | Sorghum | nucleus | 25.84 | 25.12 |
| EES13346 | Sorghum | nucleus | 21.05 | 24.93 |
| EER97608 | Sorghum | nucleus | 21.05 | 23.1 |
| EER97244 | Sorghum | nucleus | 20.81 | 22.66 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:8067214 | UniProt:C5YP75 | EnsemblPlants:EES17106 | ProteinID:EES17106 |
| ProteinID:EES17106.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | GO:GO:2000652 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF577 |
| InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3008G112200 | SUPFAM:SSF46689 | UniParc:UPI0001A88547 | RefSeq:XP_002443268.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:51883854..51887072
Molecular Weight (calculated)
45139.7 Da
IEP (calculated)
7.043
GRAVY (calculated)
-0.576
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKPECPAAA NSGNAGGAAA ATKLRKGLWS PEEDERLVAY MLRSGQGSWS DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEELI VSLHAILGNR
101: WSQIAARLPG RTDNEIKNFW NSTIKKRLKN TSATSSPAAT ECASPEPNNK VAAGSCPDLA GLDHQDGGHH HHHHLMTTTT TGLWMVDSSS SCTSSTSPMH
201: QRQPPPTTAI MAAAAVAATR SYGGLVPFPD QLRGVMADAS PPGRFFHGHA APPFKHQVAA LHHGGFYGST PPHHHGMMAT MEGGGCFMRG EDMFVGVVPP
301: LLDPMSAAAQ EQEQGQQGLM ASSGSNNAKN NNNSNNTTET TTTTTLSNNE SNITENNTNT KDNINTISQV NNGSNVAAVF WEGAHQQYMS RNVMHGEWDL
401: EELMKDVSSL PFLDFQVE
101: WSQIAARLPG RTDNEIKNFW NSTIKKRLKN TSATSSPAAT ECASPEPNNK VAAGSCPDLA GLDHQDGGHH HHHHLMTTTT TGLWMVDSSS SCTSSTSPMH
201: QRQPPPTTAI MAAAAVAATR SYGGLVPFPD QLRGVMADAS PPGRFFHGHA APPFKHQVAA LHHGGFYGST PPHHHGMMAT MEGGGCFMRG EDMFVGVVPP
301: LLDPMSAAAQ EQEQGQQGLM ASSGSNNAKN NNNSNNTTET TTTTTLSNNE SNITENNTNT KDNINTISQV NNGSNVAAVF WEGAHQQYMS RNVMHGEWDL
401: EELMKDVSSL PFLDFQVE
001: MRKPEVAIAA STHQVKKMKK GLWSPEEDSK LMQYMLSNGQ GCWSDVAKNA GLQRCGKSCR LRWINYLRPD LKRGAFSPQE EDLIIRFHSI LGNRWSQIAA
101: RLPGRTDNEI KNFWNSTIKK RLKKMSDTSN LINNSSSSPN TASDSSSNSA SSLDIKDIIG SFMSLQEQGF VNPSLTHIQT NNPFPTGNMI SHPCNDDFTP
201: YVDGIYGVNA GVQGELYFPP LECEEGDWYN ANINNHLDEL NTNGSGNAPE GMRPVEEFWD LDQLMNTEVP SFYFNFKQSI
101: RLPGRTDNEI KNFWNSTIKK RLKKMSDTSN LINNSSSSPN TASDSSSNSA SSLDIKDIIG SFMSLQEQGF VNPSLTHIQT NNPFPTGNMI SHPCNDDFTP
201: YVDGIYGVNA GVQGELYFPP LECEEGDWYN ANINNHLDEL NTNGSGNAPE GMRPVEEFWD LDQLMNTEVP SFYFNFKQSI
Arabidopsis Description
MYB46Transcription factor MYB46 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.