Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023931_P001 | Maize | nucleus | 26.15 | 76.29 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 66.43 | 67.38 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 56.54 | 53.87 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 24.38 | 48.59 |
| KRH27485 | Soybean | nucleus | 50.53 | 45.4 |
| KRH20828 | Soybean | nucleus | 49.82 | 45.34 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 45.23 | 44.29 |
| Solyc11g065840.1.1 | Tomato | nucleus | 55.12 | 44.19 |
| PGSC0003DMT400018995 | Potato | nucleus | 54.77 | 44.16 |
| KRG93751 | Soybean | nucleus | 50.18 | 42.26 |
| KRH18309 | Soybean | nucleus | 49.12 | 40.76 |
| AT3G08500.1 | Thale cress | nucleus | 47.35 | 39.07 |
| CDY35982 | Canola | nucleus | 44.88 | 37.91 |
| Bra029696.1-P | Field mustard | nucleus | 44.52 | 37.84 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 51.94 | 37.79 |
| TraesCS5D01G113300.1 | Wheat | nucleus | 51.94 | 37.79 |
| Solyc01g087130.2.1 | Tomato | nucleus | 46.64 | 37.5 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 51.59 | 37.44 |
| PGSC0003DMT400017709 | Potato | nucleus | 46.64 | 37.18 |
| CDY27999 | Canola | nucleus | 43.82 | 37.01 |
| GSMUA_Achr11P... | Banana | nucleus | 30.39 | 36.91 |
| Bra001284.1-P | Field mustard | nucleus | 43.46 | 36.18 |
| CDX74013 | Canola | nucleus | 43.46 | 36.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.98 | 36.0 |
| CDY70536 | Canola | nucleus | 43.46 | 35.86 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 33.57 | 33.57 |
| EES17106 | Sorghum | nucleus | 49.47 | 33.49 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 35.69 | 32.9 |
| GSMUA_Achr3P28540_001 | Banana | nucleus | 34.63 | 31.92 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 34.28 | 30.79 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 33.22 | 30.72 |
| HORVU5Hr1G027750.1 | Barley | nucleus | 50.18 | 30.6 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 37.1 | 30.52 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 26.5 | 30.49 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 32.16 | 30.43 |
| GSMUA_Achr10P... | Banana | nucleus | 31.1 | 29.63 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 35.69 | 29.45 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 34.63 | 29.34 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 28.62 | 29.14 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 36.4 | 28.61 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 27.21 | 28.21 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 30.39 | 28.2 |
| GSMUA_Achr6P36930_001 | Banana | nucleus | 30.74 | 27.97 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 27.56 | 27.96 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 27.92 | 27.24 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 34.98 | 27.12 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 35.34 | 27.03 |
| GSMUA_Achr8P03510_001 | Banana | nucleus | 30.39 | 26.96 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 34.28 | 26.94 |
| GSMUA_Achr11P... | Banana | nucleus | 35.69 | 26.93 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 35.69 | 26.51 |
| GSMUA_Achr9P25110_001 | Banana | nucleus | 29.33 | 26.35 |
| GSMUA_Achr9P11190_001 | Banana | nucleus | 30.39 | 26.3 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 34.63 | 26.13 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 28.62 | 26.13 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 27.56 | 25.32 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP21080_001 | EnsemblPlants:GSMUA_AchrUn_randomT21080_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG21080_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF915 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002959030 | UniProt:M0UB16 | MapMan:15.5.2.1 | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG21080_001]
Coordinates
chrchrUn_random:+:102480920..102482295
Molecular Weight (calculated)
31252.7 Da
IEP (calculated)
6.253
GRAVY (calculated)
-0.609
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRKNELTGD STNVDGNSKL RKGLWSPEED EKLMNYMLRN GQGCWSDVAR NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEELIAHLH SILGNRWSQI
101: ASRLPGRTDN EIKNFWNSTI KKRLKNSTNT GDPNPKAAIG SFAGAKEHQR QSVYTHSSPP SSSSSSSVHG FSVGNQYDLL PLPGAAGCGV TRVEDSYFHE
201: PQDLAQVGME MAMVKGGLMG AGCELFVPPL ESSQEENAMN DTSGVDVSDG GGVFWEGENM RVAQWELGDL MKDASFPFPW FLS
101: ASRLPGRTDN EIKNFWNSTI KKRLKNSTNT GDPNPKAAIG SFAGAKEHQR QSVYTHSSPP SSSSSSSVHG FSVGNQYDLL PLPGAAGCGV TRVEDSYFHE
201: PQDLAQVGME MAMVKGGLMG AGCELFVPPL ESSQEENAMN DTSGVDVSDG GGVFWEGENM RVAQWELGDL MKDASFPFPW FLS
001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
Arabidopsis Description
MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.