Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023931_P001 | Maize | nucleus | 26.88 | 77.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 67.38 | 66.43 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 60.22 | 56.57 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 24.01 | 47.18 |
| KRH27485 | Soybean | nucleus | 52.69 | 46.67 |
| KRH20828 | Soybean | nucleus | 51.97 | 46.62 |
| PGSC0003DMT400018995 | Potato | nucleus | 57.71 | 45.87 |
| Solyc11g065840.1.1 | Tomato | nucleus | 57.35 | 45.33 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 46.59 | 44.98 |
| KRG93751 | Soybean | nucleus | 51.97 | 43.15 |
| Solyc01g087130.2.1 | Tomato | nucleus | 51.97 | 41.19 |
| KRH18309 | Soybean | nucleus | 50.18 | 41.06 |
| PGSC0003DMT400017709 | Potato | nucleus | 51.61 | 40.56 |
| Bra029696.1-P | Field mustard | nucleus | 48.39 | 40.54 |
| CDY35982 | Canola | nucleus | 48.39 | 40.3 |
| AT3G08500.1 | Thale cress | nucleus | 49.46 | 40.23 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 55.2 | 39.59 |
| TraesCS5D01G113300.1 | Wheat | nucleus | 55.2 | 39.59 |
| CDY27999 | Canola | nucleus | 47.31 | 39.4 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 54.12 | 38.72 |
| Bra001284.1-P | Field mustard | nucleus | 46.59 | 38.24 |
| CDX74013 | Canola | nucleus | 46.59 | 38.24 |
| CDY70536 | Canola | nucleus | 46.59 | 37.9 |
| GSMUA_Achr11P... | Banana | nucleus | 31.18 | 37.34 |
| EES17106 | Sorghum | nucleus | 54.12 | 36.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.13 | 35.64 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 33.33 | 32.86 |
| HORVU5Hr1G027750.1 | Barley | nucleus | 53.76 | 32.33 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 35.13 | 31.92 |
| GSMUA_Achr3P28540_001 | Banana | nucleus | 33.33 | 30.29 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 34.05 | 30.16 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 36.2 | 29.45 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 36.2 | 29.36 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 31.9 | 29.09 |
| GSMUA_Achr10P... | Banana | nucleus | 30.82 | 28.96 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 25.45 | 28.86 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 34.41 | 28.74 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 30.11 | 28.09 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 27.96 | 28.06 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 27.6 | 27.6 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 30.11 | 27.54 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 34.77 | 26.94 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 26.16 | 26.74 |
| GSMUA_Achr6P36930_001 | Banana | nucleus | 29.39 | 26.37 |
| GSMUA_Achr8P03510_001 | Banana | nucleus | 30.11 | 26.33 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 33.69 | 26.11 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 35.13 | 25.72 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 33.33 | 25.48 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 33.69 | 25.41 |
| GSMUA_Achr9P25110_001 | Banana | nucleus | 28.67 | 25.4 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 26.16 | 25.17 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 27.96 | 25.16 |
| GSMUA_Achr9P11190_001 | Banana | nucleus | 29.39 | 25.08 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 33.69 | 25.07 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 27.24 | 24.68 |
| GSMUA_Achr11P... | Banana | nucleus | 32.97 | 24.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr8G31350_001 | EnsemblPlants:GSMUA_Achr8P31350_001 | EnsemblPlants:GSMUA_Achr8T31350_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0TV87 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF915 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295D388 | SEG:seg | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G31350_001]
Coordinates
chr8:+:33047459..33048451
Molecular Weight (calculated)
30606.8 Da
IEP (calculated)
4.754
GRAVY (calculated)
-0.615
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKPDAPPSG STGGGGNKLR KGLWSPEEDE KLMNYMLRNG QGCWSDVARN ADLQRCGKSC RLRWINYLRP DLKRGAFSLQ EEELIVHLHS ILGNRWSQIA
101: ARLPGRTDNE IKNFWNSTIK KRLKNSNNSG DAETRGGAAS LAHVKEHQLQ GMYVDSSSSS SSSSMPDSSY FHEPPTVAQA GMENGFYGDG QGVMMVEGGL
201: MGGGCELFVP PLESSQEETL MNDGGAGSMV SSADISNSGD VNKIQSGMLW EDEDIRVGEW ELGDLMKDVS FPFLDFQVE
101: ARLPGRTDNE IKNFWNSTIK KRLKNSNNSG DAETRGGAAS LAHVKEHQLQ GMYVDSSSSS SSSSMPDSSY FHEPPTVAQA GMENGFYGDG QGVMMVEGGL
201: MGGGCELFVP PLESSQEETL MNDGGAGSMV SSADISNSGD VNKIQSGMLW EDEDIRVGEW ELGDLMKDVS FPFLDFQVE
001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
Arabidopsis Description
MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.