Factsheet for GSMUA_Achr10P08070_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g00320.t01	Wine grape	nucleus	58.92	57.57
KRH77586	Soybean	nucleus	59.6	54.29
KRH27893	Soybean	nucleus	58.92	53.85
KRH41236	Soybean	nucleus	57.24	52.96
KRH59965	Soybean	nucleus	56.23	52.19
GSMUA_Achr6P36930_001	Banana	nucleus	54.21	51.77
Solyc08g081500.1.1	Tomato	nucleus	54.21	48.64
GSMUA_Achr4P25340_001	Banana	nucleus	23.23	48.59
EES13346	Sorghum	nucleus	53.2	44.76
HORVU7Hr1G072450.2	Barley	nucleus	50.84	44.28
TraesCS7D01G300000.1	Wheat	nucleus	50.51	43.73
TraesCS7B01G204800.1	Wheat	nucleus	50.51	43.48
TraesCS7A01G304500.1	Wheat	nucleus	50.17	43.44
Zm00001d024630_P002	Maize	nucleus	52.86	43.37
Os08t0151300-01	Rice	nucleus	51.85	42.9
Bra027771.1-P	Field mustard	nucleus	51.85	42.08
AT1G63910.1	Thale cress	nucleus	52.19	41.89
CDY38211	Canola	nucleus	51.52	41.46
CDY08343	Canola	nucleus	51.52	41.46
Bra027668.1-P	Field mustard	nucleus	50.84	40.92
CDY25547	Canola	nucleus	50.84	40.81
GSMUA_Achr11P...	Banana	nucleus	29.63	37.77
GSMUA_Achr4P19560_001	Banana	nucleus	34.01	35.69
GSMUA_AchrUn_...	Banana	nucleus	31.99	34.55
GSMUA_Achr6P35800_001	Banana	nucleus	32.66	32.44
GSMUA_Achr3P28540_001	Banana	nucleus	33.0	31.92
GSMUA_Achr2P01830_001	Banana	nucleus	32.66	31.6
GSMUA_Achr9P22190_001	Banana	nucleus	33.0	31.11
GSMUA_AchrUn_...	Banana	nucleus	29.63	31.1
GSMUA_Achr8P31350_001	Banana	nucleus	28.96	30.82
GSMUA_Achr4P11960_001	Banana	nucleus	24.92	30.08
GSMUA_Achr4P06410_001	Banana	nucleus	30.98	30.07
GSMUA_Achr1P18990_001	Banana	nucleus	33.67	29.94
GSMUA_Achr4P13280_001	Banana	nucleus	30.64	29.84
GSMUA_Achr9P11190_001	Banana	nucleus	32.66	29.66
GSMUA_Achr8P03510_001	Banana	nucleus	31.65	29.47
GSMUA_Achr4P29410_001	Banana	nucleus	27.61	29.39
GSMUA_Achr8P11340_001	Banana	nucleus	27.27	29.14
GSMUA_Achr2P07780_001	Banana	nucleus	28.28	28.28
GSMUA_Achr7P17250_001	Banana	nucleus	32.66	28.28
GSMUA_Achr9P25110_001	Banana	nucleus	29.97	28.25
GSMUA_Achr3P12200_001	Banana	nucleus	34.01	28.06
GSMUA_Achr2P18440_001	Banana	nucleus	34.34	27.95
GSMUA_Achr1P17480_001	Banana	nucleus	25.59	27.84
GSMUA_Achr2P07930_001	Banana	nucleus	35.35	27.56
GSMUA_Achr3P24580_001	Banana	nucleus	31.65	27.33
GSMUA_Achr8P18730_001	Banana	nucleus	32.66	26.22
GSMUA_Achr5P18400_001	Banana	nucleus	33.0	26.13
GSMUA_Achr1P25120_001	Banana	nucleus	31.31	25.83
GSMUA_Achr11P...	Banana	nucleus	31.99	25.33
GSMUA_AchrUn_...	Banana	plasma membrane	26.26	25.16
GSMUA_Achr4P05410_001	Banana	nucleus	23.91	24.48
GSMUA_Achr2P11450_001	Banana	nucleus	24.58	23.7

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
EnsemblPlantsGene:GSMUA_Achr10G08070_001	EnsemblPlants:GSMUA_Achr10P08070_001	EnsemblPlants:GSMUA_Achr10T08070_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0RGD3
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF451	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000296678A	SEG:seg	:	:

Description

myb-like DNA-binding domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G08070_001]

Coordinates

chr10:-:18092917..18098000

Molecular Weight (calculated)

33552.5 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.600

Length

297 amino acids

Sequence
(BLAST)

001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT TYGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF TPEEEKLIIN LHEIVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIHKPS KAAQTATPSG FDHVQPVFST ADQFDAILHH NLPKPSAADP IFPPPPCPLF MFDVSAGDSG SATGSTKEEF VQEVTTLTSD
201: LWNPTHQQDQ AMPPFLAFTA CMESNYLPPL VDGMGGMVPC CVADDEEASR HPFEKQELSE WVDSRQYSSP LIWDQVAGTS LGDAGFYTMT NQTKTHQ

Best Arabidopsis Sequence Match ( AT1G63910.1 )
(BLAST)

001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF

Arabidopsis Description

AtMYB103MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.