Factsheet for HORVU7Hr1G072450.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G204800.1	Wheat	nucleus	97.07	95.94
TraesCS7A01G304500.1	Wheat	nucleus	96.48	95.92
TraesCS7D01G300000.1	Wheat	nucleus	96.48	95.92
Os08t0151300-01	Rice	nucleus	70.97	67.41
EES13346	Sorghum	nucleus	63.64	61.47
Zm00001d024630_P002	Maize	nucleus	62.46	58.84
GSMUA_Achr10P...	Banana	nucleus	44.28	50.84
VIT_02s0025g00320.t01	Wine grape	nucleus	43.7	49.01
KRH77586	Soybean	nucleus	46.04	48.16
KRH27893	Soybean	nucleus	45.75	48.0
KRH41236	Soybean	nucleus	45.16	47.98
KRH59965	Soybean	nucleus	43.99	46.88
GSMUA_Achr6P36930_001	Banana	nucleus	42.52	46.62
Solyc08g081500.1.1	Tomato	nucleus	42.82	44.11
Bra027771.1-P	Field mustard	nucleus	46.04	42.9
AT1G63910.1	Thale cress	nucleus	46.33	42.7
Bra027668.1-P	Field mustard	nucleus	45.16	41.73
HORVU3Hr1G066860.11	Barley	nucleus	29.33	34.01
HORVU3Hr1G047290.2	Barley	nucleus	27.27	30.69
HORVU6Hr1G060610.3	Barley	nucleus	24.63	27.27
HORVU3Hr1G016940.1	Barley	nucleus	22.87	27.27
HORVU2Hr1G091590.1	Barley	nucleus	24.05	26.97
HORVU6Hr1G060600.2	Barley	mitochondrion	17.6	26.91
HORVU6Hr1G007010.2	Barley	nucleus	24.63	26.84
HORVU2Hr1G051030.3	Barley	nucleus	29.33	26.18
HORVU2Hr1G051010.1	Barley	nucleus, plasma membrane	28.45	25.39
HORVU1Hr1G079040.4	Barley	nucleus, plastid	26.1	25.28
HORVU7Hr1G082020.1	Barley	nucleus	24.93	24.29
HORVU1Hr1G017970.4	Barley	nucleus	30.5	24.24
HORVU5Hr1G027750.1	Barley	nucleus	25.51	18.75
HORVU1Hr1G079030.2	Barley	nucleus	21.99	15.82
CDY70602	Canola	nucleus, plastid	2.93	6.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019748	GO:GO:0045893	GO:GO:1901430
GO:GO:2000652	EnsemblPlantsGene:HORVU7Hr1G072450	EnsemblPlants:HORVU7Hr1G072450.2	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0V1S7
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF451	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00029655AB	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:404936300..404938849

Molecular Weight (calculated)

37757.5 Da

IEP (calculated)

6.544

GRAVY (calculated)

-0.550

Length

341 amino acids

Sequence
(BLAST)

001: MGHHSCCNQQ KVKRGLWSPE EDEKLVRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF TPEEEKLIIS LHAIVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKAP AAPNVTTTSS TTSTSPPNNG LAPCSGSTAT SDVHHRRLQH PTFSCAPAGD HLQLDAIISH HQSTSLALPV AAGQDSPPGM
201: SHHCPLFMFD AGVVSTPFAS ASAQQHPFIA SFTAAMAEAD TPSCYHLPPL VDGMGAMGMC MEAMDDHCSA GAGMGNVCFG DEQRQRRRPE LEEEEREQLG
301: QHEQWDEEQL LMWDDQEVLT PSNMEAIQNG AHSLLFMGPN A

Best Arabidopsis Sequence Match ( AT1G63910.1 )
(BLAST)

001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF

Arabidopsis Description

AtMYB103MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.