Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G370700.1 | Wheat | nucleus | 67.76 | 74.37 |
| TraesCS2D01G366800.1 | Wheat | nucleus | 66.45 | 73.19 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 67.11 | 73.12 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 65.46 | 72.63 |
| TraesCS2D01G367000.1 | Wheat | nucleus | 67.11 | 72.6 |
| TraesCS2A01G370300.1 | Wheat | nucleus | 66.12 | 72.56 |
| TraesCS2A01G370400.1 | Wheat | nucleus | 66.12 | 71.02 |
| TraesCS2D01G366900.1 | Wheat | nucleus | 65.79 | 70.67 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 63.49 | 70.44 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 64.8 | 69.61 |
| Solyc01g009650.1.1 | Tomato | nucleus | 19.74 | 65.93 |
| Os04t0532800-01 | Rice | nucleus | 52.63 | 58.61 |
| EES11177 | Sorghum | nucleus | 54.28 | 55.37 |
| HORVU6Hr1G060600.2 | Barley | mitochondrion | 38.49 | 52.47 |
| HORVU6Hr1G060610.3 | Barley | nucleus | 50.0 | 49.35 |
| Bra013900.1-P | Field mustard | nucleus | 30.59 | 43.26 |
| KRH35334 | Soybean | nucleus | 35.53 | 40.0 |
| CDY32589 | Canola | nucleus | 32.24 | 39.04 |
| CDY50197 | Canola | nucleus | 31.25 | 38.0 |
| PGSC0003DMT400037080 | Potato | nucleus | 34.54 | 37.77 |
| AT5G52260.1 | Thale cress | nucleus | 33.22 | 37.69 |
| KRH09018 | Soybean | nucleus | 35.86 | 37.46 |
| CDY38910 | Canola | nucleus | 32.57 | 37.08 |
| Bra029129.1-P | Field mustard | nucleus | 32.57 | 37.08 |
| VIT_16s0050g00050.t01 | Wine grape | nucleus | 36.18 | 36.91 |
| KRH38485 | Soybean | nucleus | 35.2 | 36.77 |
| CDX94440 | Canola | nucleus | 30.92 | 36.58 |
| Solyc03g025870.2.1 | Tomato | nucleus | 33.22 | 36.2 |
| CDY64708 | Canola | nucleus | 30.59 | 36.05 |
| Bra018027.1-P | Field mustard | nucleus | 30.59 | 36.05 |
| AT4G25560.1 | Thale cress | nucleus | 33.22 | 35.69 |
| CDX89413 | Canola | nucleus | 31.58 | 35.56 |
| CDX92718 | Canola | nucleus | 30.59 | 35.5 |
| HORVU6Hr1G007010.2 | Barley | nucleus | 36.51 | 35.46 |
| CDY05881 | Canola | nucleus | 29.61 | 34.88 |
| AT3G48920.1 | Thale cress | nucleus | 28.95 | 33.72 |
| KRG91494 | Soybean | nucleus | 34.87 | 31.83 |
| HORVU3Hr1G066860.11 | Barley | nucleus | 28.29 | 29.25 |
| HORVU3Hr1G047290.2 | Barley | nucleus | 25.66 | 25.74 |
| HORVU3Hr1G016940.1 | Barley | nucleus | 23.36 | 24.83 |
| HORVU7Hr1G082020.1 | Barley | nucleus | 27.96 | 24.29 |
| HORVU7Hr1G072450.2 | Barley | nucleus | 26.97 | 24.05 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 32.24 | 22.84 |
| HORVU2Hr1G051030.3 | Barley | nucleus | 28.62 | 22.77 |
| HORVU1Hr1G079040.4 | Barley | nucleus, plastid | 25.99 | 22.44 |
| HORVU2Hr1G051010.1 | Barley | nucleus, plasma membrane | 27.63 | 21.99 |
| Bra019154.1-P | Field mustard | nucleus | 31.58 | 20.82 |
| HORVU5Hr1G027750.1 | Barley | nucleus | 25.66 | 16.81 |
| HORVU1Hr1G079030.2 | Barley | nucleus | 23.36 | 14.98 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G091590.1 | EnsemblPlantsGene:HORVU2Hr1G091590 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | ncoils:Coil |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF748 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:648553135..648557883
Molecular Weight (calculated)
29790.0 Da
IEP (calculated)
8.828
GRAVY (calculated)
-0.671
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCKSCQKPK AQHRKGLWSP EEDQKLRDFI VRHGHSCWST VPVKAGLQRN GKSCRLRWIN YLRPGLKHGM FSREEEETVM GLHAALGNKW SQIAQHLPGR
101: TDNEVKNYWN SYLKKRVEGA RSPAKSAGSG APRSPTPSES GCGRERSVVN QQPCNSGSSG PPESSSTADE SSSLTVPGAA VSIRPHAPVL PKVMFADWLD
201: MDMDMDYGTG MMAPAPSALD AAFGGSPAQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXCHWERSP HDYYNTSCRY RMGSRPAAWD TCGEYCMTRY
301: FGNS
101: TDNEVKNYWN SYLKKRVEGA RSPAKSAGSG APRSPTPSES GCGRERSVVN QQPCNSGSSG PPESSSTADE SSSLTVPGAA VSIRPHAPVL PKVMFADWLD
201: MDMDMDYGTG MMAPAPSALD AAFGGSPAQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXCHWERSP HDYYNTSCRY RMGSRPAAWD TCGEYCMTRY
301: FGNS
001: MTKSGERPKQ RQRKGLWSPE EDQKLKSFIL SRGHACWTTV PILAGLQRNG KSCRLRWINY LRPGLKRGSF SEEEEETILT LHSSLGNKWS RIAKYLPGRT
101: DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID
201: YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY ANYYSSGDFF INSDQNYV
101: DNEIKNYWHS YLKKRWLKSQ PQLKSQISDL TESPSSLLSC GKRNLETETL DHVISFQKFS ENPTSSPSKE SNNNMIMNNS NNLPKLFFSE WISSSNPHID
201: YSSAFTDSKH INETQDQINE EEVMMINNNN YSSLEDVMLR TDFLQPDHEY ANYYSSGDFF INSDQNYV
Arabidopsis Description
AtMYB19MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.