Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018027.1-P | Field mustard | nucleus | 70.88 | 71.71 |
| CDY64708 | Canola | nucleus | 70.5 | 71.32 |
| CDY05881 | Canola | nucleus | 66.67 | 67.44 |
| Solyc01g009650.1.1 | Tomato | nucleus | 19.92 | 57.14 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 27.2 | 50.0 |
| KRH35334 | Soybean | nucleus | 39.85 | 38.52 |
| KRH09018 | Soybean | nucleus | 41.38 | 37.11 |
| AT5G52260.1 | Thale cress | nucleus | 37.93 | 36.94 |
| AT4G25560.1 | Thale cress | nucleus | 39.46 | 36.4 |
| KRH38485 | Soybean | nucleus | 40.23 | 36.08 |
| TraesCS2D01G367000.1 | Wheat | nucleus | 38.31 | 35.59 |
| VIT_16s0050g00050.t01 | Wine grape | nucleus | 40.61 | 35.57 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 37.93 | 35.48 |
| Solyc03g025870.2.1 | Tomato | nucleus | 37.16 | 34.77 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 36.4 | 34.67 |
| TraesCS2D01G366900.1 | Wheat | nucleus | 37.55 | 34.63 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 37.55 | 34.63 |
| TraesCS2A01G370400.1 | Wheat | nucleus | 37.55 | 34.63 |
| PGSC0003DMT400037080 | Potato | nucleus | 36.78 | 34.53 |
| TraesCS2D01G366800.1 | Wheat | nucleus | 36.4 | 34.42 |
| TraesCS2A01G370300.1 | Wheat | nucleus | 36.4 | 34.3 |
| TraesCS2A01G370700.1 | Wheat | nucleus | 36.4 | 34.3 |
| Os04t0532800-01 | Rice | nucleus | 35.63 | 34.07 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 35.63 | 33.94 |
| Zm00001d051267_P001 | Maize | nucleus | 35.25 | 33.09 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 35.25 | 32.97 |
| EES11177 | Sorghum | nucleus | 37.55 | 32.89 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 30.65 | 32.52 |
| TraesCS6A01G236700.1 | Wheat | nucleus | 35.63 | 32.4 |
| Zm00001d017383_P001 | Maize | nucleus | 35.63 | 31.96 |
| TraesCS6B01G265200.1 | Wheat | nucleus | 35.63 | 31.53 |
| TraesCS6D01G219300.1 | Wheat | nucleus | 35.25 | 31.19 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 32.95 | 30.94 |
| KRG91494 | Soybean | nucleus | 38.7 | 30.33 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 35.63 | 30.19 |
| HORVU6Hr1G060610.3 | Barley | nucleus | 35.25 | 29.87 |
| HORVU6Hr1G060600.2 | Barley | mitochondrion | 24.9 | 29.15 |
| EES06150 | Sorghum | nucleus | 33.33 | 29.1 |
| HORVU2Hr1G091590.1 | Barley | nucleus | 33.72 | 28.95 |
| Zm00001d014989_P001 | Maize | nucleus | 34.1 | 28.9 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 29.89 | 28.57 |
| EES07547 | Sorghum | nucleus | 33.33 | 28.52 |
| HORVU6Hr1G007010.2 | Barley | nucleus | 33.72 | 28.11 |
| TraesCS6B01G053100.1 | Wheat | nucleus | 32.95 | 27.92 |
| TraesCS6D01G043600.1 | Wheat | nucleus | 33.72 | 27.85 |
| AT5G12870.1 | Thale cress | nucleus | 28.74 | 26.79 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 29.5 | 26.55 |
| TraesCS6A01G037700.1 | Wheat | nucleus | 34.1 | 25.07 |
| AT1G57560.1 | Thale cress | nucleus | 29.89 | 24.84 |
| AT4G01680.2 | Thale cress | nucleus | 30.65 | 22.99 |
| AT3G12720.1 | Thale cress | nucleus | 26.82 | 22.8 |
| AT5G26660.1 | Thale cress | nucleus | 29.89 | 22.16 |
| AT3G08500.1 | Thale cress | nucleus | 28.74 | 21.87 |
| AT1G09540.1 | Thale cress | nucleus | 29.89 | 21.31 |
| AT3G13890.1 | Thale cress | nucleus | 28.35 | 20.16 |
| AT1G63910.1 | Thale cress | nucleus | 27.2 | 19.19 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:824053 | ProteinID:AEE78473.1 | ArrayExpress:AT3G48920 | EnsemblPlantsGene:AT3G48920 |
| RefSeq:AT3G48920 | TAIR:AT3G48920 | RefSeq:AT3G48920-TAIR-G | EnsemblPlants:AT3G48920.1 | TAIR:AT3G48920.1 | EMBL:AY519596 |
| Symbol:AtMYB45 | ProteinID:CAB62018.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_190461.1 | PFAM:PF00249 | PO:PO:0000084 |
| PO:PO:0007616 | PO:PO:0009031 | PO:PO:0020100 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF563 |
| UniProt:Q9SMT1 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A1C98 | : |
Description
AtMYB45MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1]
Coordinates
chr3:+:18139172..18140772
Molecular Weight (calculated)
29877.4 Da
IEP (calculated)
8.326
GRAVY (calculated)
-0.681
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFKSEKSNR EMKSKEKQRK GLWSPEEDEK LRSHVLKYGH GCWSTIPLQA GLQRNGKSCR LRWVNYLRPG LKKSLFTKQE ETILLSLHSM LGNKWSQISK
101: FLPGRTDNEI KNYWHSNLKK GVTLKQHETT KKHQTPLITN SLEALQSSTE RSSSSINVGE TSNAQTSSFS PNLVFSEWLD HSLLMDQSPQ KSSYVQNLVL
201: PEERGFIGPC GPRYLGNDSL PDFVPNSEFL LDDEISSEIE FCTSFSDNFL FDGLINELRP M
101: FLPGRTDNEI KNYWHSNLKK GVTLKQHETT KKHQTPLITN SLEALQSSTE RSSSSINVGE TSNAQTSSFS PNLVFSEWLD HSLLMDQSPQ KSSYVQNLVL
201: PEERGFIGPC GPRYLGNDSL PDFVPNSEFL LDDEISSEIE FCTSFSDNFL FDGLINELRP M
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.