Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05331 | Canola | nucleus | 36.36 | 96.97 |
| CDY05516 | Canola | nucleus | 36.08 | 96.21 |
| Zm00001d008206_P001 | Maize | nucleus | 18.18 | 87.67 |
| CDX87038 | Canola | nucleus | 82.67 | 86.09 |
| CDX88230 | Canola | nucleus | 86.36 | 85.39 |
| CDY68301 | Canola | nucleus | 81.25 | 85.37 |
| Bra036588.1-P | Field mustard | nucleus | 81.25 | 85.37 |
| CDX80576 | Canola | nucleus | 86.08 | 84.87 |
| Bra009910.1-P | Field mustard | nucleus | 77.27 | 82.42 |
| CDY05517 | Canola | plastid | 35.8 | 73.68 |
| Bra020526.1-P | Field mustard | nucleus | 77.84 | 62.27 |
| GSMUA_Achr11P... | Banana | nucleus | 30.4 | 45.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.51 | 45.45 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 35.23 | 43.82 |
| AT1G57560.1 | Thale cress | nucleus | 38.92 | 43.63 |
| Zm00001d024784_P001 | Maize | nucleus | 30.68 | 42.19 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 35.51 | 40.72 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 39.2 | 40.23 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 38.64 | 39.53 |
| Zm00001d010907_P001 | Maize | nucleus | 47.16 | 38.97 |
| OQU77376 | Sorghum | nucleus | 46.88 | 38.37 |
| AT1G09540.1 | Thale cress | nucleus | 39.77 | 38.25 |
| Os05t0140100-01 | Rice | nucleus | 46.31 | 38.17 |
| Os01t0285300-01 | Rice | nucleus | 46.31 | 38.08 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 36.08 | 38.02 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 38.64 | 37.78 |
| EES02806 | Sorghum | nucleus | 45.74 | 37.7 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 45.74 | 37.53 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 45.45 | 37.12 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 45.17 | 37.06 |
| Zm00001d040527_P001 | Maize | nucleus | 29.55 | 37.01 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 45.17 | 36.98 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 36.93 | 36.11 |
| AT4G01680.2 | Thale cress | nucleus | 35.51 | 35.92 |
| KRH68389 | Soybean | nucleus | 42.33 | 35.65 |
| KRG90431 | Soybean | nucleus | 42.9 | 35.28 |
| KRH33726 | Soybean | nucleus | 42.9 | 35.2 |
| KRG96660 | Soybean | nucleus | 42.9 | 34.79 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 35.8 | 34.52 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 36.36 | 34.13 |
| AT5G12870.1 | Thale cress | nucleus | 26.99 | 33.93 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 36.65 | 33.86 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 41.76 | 33.49 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 34.94 | 33.24 |
| PGSC0003DMT400040774 | Potato | nucleus | 38.35 | 33.17 |
| Solyc10g044680.1.1 | Tomato | nucleus | 37.5 | 33.17 |
| GSMUA_Achr11P... | Banana | nucleus | 35.23 | 33.07 |
| Solyc01g102340.2.1 | Tomato | nucleus | 38.92 | 32.16 |
| PGSC0003DMT400047076 | Potato | nucleus | 38.64 | 31.92 |
| AT3G12720.1 | Thale cress | nucleus | 27.27 | 31.27 |
| AT5G52260.1 | Thale cress | nucleus | 23.58 | 30.97 |
| AT4G25560.1 | Thale cress | nucleus | 24.43 | 30.39 |
| AT3G48920.1 | Thale cress | nucleus | 22.16 | 29.89 |
| AT3G08500.1 | Thale cress | nucleus | 27.56 | 28.28 |
| AT1G63910.1 | Thale cress | nucleus | 28.41 | 27.03 |
| AT3G13890.1 | Thale cress | nucleus | 27.84 | 26.7 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:832723 | UniProt:A0A178US07 | ProteinID:AAC13592.1 | EMBL:AB005889 |
| ProteinID:AED93580.1 | EMBL:AF062913 | ArrayExpress:AT5G26660 | EnsemblPlantsGene:AT5G26660 | RefSeq:AT5G26660 | TAIR:AT5G26660 |
| RefSeq:AT5G26660-TAIR-G | EnsemblPlants:AT5G26660.1 | TAIR:AT5G26660.1 | Symbol:ATMYB86 | EMBL:AY099777 | EMBL:AY519629 |
| Unigene:At.227 | EMBL:BT008740 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_850879.1 | ProteinID:OAO95924.1 | PFAM:PF00249 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF474 | UniProt:Q8LPH6 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000009DA61 | SEG:seg | : | : | : | : |
Description
MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
Coordinates
chr5:-:9331565..9333284
Molecular Weight (calculated)
39792.4 Da
IEP (calculated)
8.036
GRAVY (calculated)
-0.687
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.