Factsheet for Bra036588.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68301	Canola	nucleus	99.4	99.4
Zm00001d008206_P001	Maize	nucleus	19.4	89.04
AT5G26660.1	Thale cress	nucleus	85.37	81.25
Bra009910.1-P	Field mustard	nucleus	74.63	75.76
Bra020526.1-P	Field mustard	nucleus	77.01	58.64
GSMUA_AchrUn_...	Banana	nucleus	37.61	45.82
GSMUA_Achr11P...	Banana	nucleus	31.64	45.49
GSMUA_Achr4P19560_001	Banana	nucleus	36.12	42.76
Zm00001d024784_P001	Maize	nucleus	32.24	42.19
Bra031669.1-P	Field mustard	nucleus	39.7	40.67
GSMUA_Achr2P01830_001	Banana	nucleus	36.72	40.07
Bra020016.1-P	Field mustard	nucleus	39.4	39.76
GSMUA_Achr7P17250_001	Banana	nucleus	40.6	39.65
Bra030783.1-P	Field mustard	nucleus	40.0	38.84
Zm00001d010907_P001	Maize	nucleus	49.25	38.73
OQU77376	Sorghum	nucleus	48.96	38.14
GSMUA_Achr1P18990_001	Banana	nucleus	37.91	38.02
Os05t0140100-01	Rice	nucleus	48.36	37.94
Os01t0285300-01	Rice	nucleus	48.36	37.85
GSMUA_Achr3P24580_001	Banana	nucleus	38.81	37.79
Zm00001d040527_P001	Maize	nucleus	31.64	37.72
HORVU1Hr1G017970.4	Barley	nucleus	48.06	37.53
EES02806	Sorghum	nucleus	47.46	37.24
TraesCS1D01G084400.1	Wheat	nucleus	47.46	37.06
TraesCS1A01G083100.2	Wheat	nucleus	47.46	36.98
Bra036317.1-P	Field mustard	nucleus	37.01	36.9
TraesCS1B01G100600.1	Wheat	nucleus	47.46	36.89
GSMUA_Achr1P25120_001	Banana	nucleus	39.4	36.67
GSMUA_Achr3P12200_001	Banana	nucleus	38.81	36.11
Bra013900.1-P	Field mustard	nucleus	22.39	34.88
GSMUA_Achr2P18440_001	Banana	nucleus	37.91	34.79
GSMUA_Achr5P18400_001	Banana	nucleus	38.81	34.67
GSMUA_Achr11P...	Banana	nucleus	38.21	34.13
GSMUA_Achr8P18730_001	Banana	nucleus	37.61	34.05
KRH68389	Soybean	nucleus	42.39	33.97
KRG90431	Soybean	nucleus	43.28	33.88
KRH33726	Soybean	nucleus	43.28	33.8
Bra008875.1-P	Field mustard	nucleus	28.06	33.57
KRG96660	Soybean	nucleus	43.28	33.41
GSMUA_Achr2P07930_001	Banana	nucleus	37.61	33.07
PGSC0003DMT400040774	Potato	nucleus	40.0	32.92
VIT_14s0060g00240.t01	Wine grape	nucleus	42.99	32.8
Solyc10g044680.1.1	Tomato	nucleus	38.81	32.66
Bra006166.1-P	Field mustard	nucleus	27.16	32.5
Bra034738.1-P	Field mustard	nucleus	28.06	31.97
Bra039339.1-P	Field mustard	nucleus	27.76	31.63
Solyc01g102340.2.1	Tomato	nucleus	39.7	31.22
Bra029129.1-P	Field mustard	nucleus	24.78	31.09
PGSC0003DMT400047076	Potato	nucleus	39.4	30.99
Bra018027.1-P	Field mustard	nucleus	22.69	29.46
Bra029696.1-P	Field mustard	nucleus	28.66	28.83
Bra021515.1-P	Field mustard	nucleus	30.15	28.37
Bra001284.1-P	Field mustard	nucleus	28.36	27.94
Bra027389.1-P	Field mustard	nucleus	27.76	26.72
Bra027771.1-P	Field mustard	nucleus	28.66	26.23
Bra027668.1-P	Field mustard	nucleus	28.36	25.75
Bra023380.1-P	Field mustard	nucleus	11.94	19.23
Bra019154.1-P	Field mustard	nucleus	24.48	17.79

Protein Annotations

EnsemblPlants:Bra036588.1	EnsemblPlants:Bra036588.1-P	EnsemblPlantsGene:Bra036588	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF474	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002541D5D	UniProt:M4F679	MapMan:15.5.2.1	:	:

Description

AT5G26660 (E=1e-133) ATMYB4, ATMYB86 | ATMYB86 (MYB DOMAIN PROTEIN 86); specific transcriptional repressor/ transcription repressor

Coordinates

chrA09:-:1874932..1876146

Molecular Weight (calculated)

37826.3 Da

IEP (calculated)

8.162

GRAVY (calculated)

-0.636

Length

335 amino acids

Sequence
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIS RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEECLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI SDLQTLNVIN QKLTSSEVLK STGLLNNPHD QSMIVSSQPG SWWFPNQNAA FCLSSNTVSD QIVSLISSMS
201: TSSSTTPITS LNPVPELNYC NNTVPSPTNS IYSAFFGNNY TEASQINNNN NNHVVNHPHD QDMKSWASEI LHYNQSSETG LEAEVKPDIA KYYWRSASAS
301: SSPNENAEAL LHDADIEWYA KNLQKVHNMA FDQSL

Best Arabidopsis Sequence Match ( AT5G26660.1 )
(BLAST)

001: MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT
101: DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD
201: QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA
301: EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ SL

Arabidopsis Description

MYB86Transcription factor MYB86 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPH6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.